Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.41800	Gtpbp4	GTP binding protein 4	13		69237
Gene Ontology	GTP binding | nucleus
Human Homolog	GTPBP4[GTP binding protein 4]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 86 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGGTTGCTGG (369) 68.5 0.0685 P8 Cb GC TAAAAAAAAA (196) 47.3 0.0473 P8 Cb GC GGTTAAAGGA (7) 3.3 0.0033 P8 Cb GC GGATTATAAG 1.6 0.0016 P8 Cb GC TCCACACCAA (3) 1.6 0.0016 Cb medulloblastoma TGGTTGCTGG (369) 113.3 0.1133 Cb medulloblastoma TAAAAAAAAA (196) 106.4 0.1064 Cb medulloblastoma TGTTTGATAT (6) 2.3 0.0023 P8 GC+1d culture TAAAAAAAAA (196) 66.2 0.0662 P8 GC+1d culture TGGTTGCTGG (369) 57.1 0.0571 P8 GC+1d culture ACAGACTGTC (2) 4.6 0.0046 P8 GC+1d culture TCCACACCAA (3) 3.4 0.0034 P8 GC+1d culture TGTTTGATAT (6) 3.4 0.0034 P8 GC+1d culture GATGATAAAA (3) 1.1 0.0011 P8 GC+SHH+1d culture TAAAAAAAAA (196) 93.7 0.0937 P8 GC+SHH+1d culture TGGTTGCTGG (369) 89 0.089 P8 GC+SHH+1d culture ACAGACTGTC (2) 3.5 0.0035 P8 GC+SHH+1d culture GGTTAAAGGA (7) 2.3 0.0023 P8 GC+SHH+1d culture GGATTATAAG 1.2 0.0012 P8 GC+SHH+1d culture TGTTTGATAT (6) 1.2 0.0012 3T3 fibroblasts TGGTTGCTGG (369) 220.8 0.2208 3T3 fibroblasts TAAAAAAAAA (196) 7 0.007 3T3 fibroblasts TGTTTGATAT (6) 3.5 0.0035 E15 cortex TGGTTGCTGG (369) 277.1 0.2771 E15 cortex TAAAAAAAAA (196) 9.9 0.0099 E15 cortex GGTTAAAGGA (7) 4.9 0.0049 P1 cortex TGGTTGCTGG (369) 86.4 0.0864 P1 cortex TAAAAAAAAA (196) 50 0.05 P1 cortex TGTTTGATAT (6) 4.5 0.0045 Hypothalamus TGGTTGCTGG (369) 349.6 0.3496 Hypothalamus TAAAAAAAAA (196) 32.6 0.0326 Hypothalamus GGTTAAAGGA (7) 1.8 0.0018 E12.5 retina TGGTTGCTGG (369) 157.7 0.1577 E12.5 retina TAAAAAAAAA (196) 24.4 0.0244 E12.5 retina GGTTAAAGGA (7) 5.6 0.0056 E12.5 retina ACAGACTGTC (2) 3.8 0.0038 E12.5 retina TCCACACCAA (3) 1.9 0.0019 E14.5 retina TGGTTGCTGG (369) 936.5 0.9365 E14.5 retina TAAAAAAAAA (196) 41.9 0.0419 E14.5 retina GGATTATAAG 1.8 0.0018 E14.5 retina GGTTAAAGGA (7) 1.8 0.0018 E16.5 retina TGGTTGCTGG (369) 767.9 0.7679 E16.5 retina TAAAAAAAAA (196) 23.5 0.0235 E16.5 retina TCCACACCAA (3) 3.6 0.0036 E16.5 retina TGTTTGATAT (6) 3.6 0.0036 E16.5 retina GGTTAAAGGA (7) 1.8 0.0018 E18.5 retina TGGTTGCTGG (369) 252.8 0.2528 E18.5 retina TAAAAAAAAA (196) 107.3 0.1073 E18.5 retina ACAGACTGTC (2) 1.8 0.0018 P0.5 retina TGGTTGCTGG (369) 190.4 0.1904 P0.5 retina TAAAAAAAAA (196) 37.3 0.0373 P0.5 retina ACAGACTGTC (2) 2 0.002 P0.5 retina GGTTAAAGGA (7) 2 0.002 P0.5 retina TCCACACCAA (3) 2 0.002 P2.5 retina TGGTTGCTGG (369) 165.4 0.1654 P2.5 retina TAAAAAAAAA (196) 72.2 0.0722 P2.5 retina ACAGACTGTC (2) 8.8 0.0088 P2.5 retina GGTTAAAGGA (7) 5.3 0.0053 P2.5 retina GGATTATAAG 1.8 0.0018 P4.5 retina TGGTTGCTGG (369) 150.6 0.1506 P4.5 retina TAAAAAAAAA (196) 122.8 0.1228 P4.5 retina GGTTAAAGGA (7) 4 0.004 P4.5 retina TCCACACCAA (3) 4 0.004 P6.5 retina TGGTTGCTGG (369) 156.7 0.1567 P6.5 retina TAAAAAAAAA (196) 63.4 0.0634 P6.5 retina TCCACACCAA (3) 6.7 0.0067 P6.5 retina ACAGACTGTC (2) 5 0.005 P6.5 retina GGATTATAAG 1.7 0.0017 P6.5 retina GGTTAAAGGA (7) 1.7 0.0017 P10.5 crx- retina TGGTTGCTGG (369) 280.5 0.2805 P10.5 crx- retina TAAAAAAAAA (196) 9.3 0.0093 P10.5 crx- retina GATGATAAAA (3) 1.9 0.0019 P10.5 crx- retina TCCACACCAA (3) 1.9 0.0019 P10.5 crx+ retina TGGTTGCTGG (369) 101.9 0.1019 P10.5 crx+ retina TAAAAAAAAA (196) 25 0.025 P10.5 crx+ retina GGTTAAAGGA (7) 1.9 0.0019 Adult retinal TGGTTGCTGG (369) 214.8 0.2148 Adult retinal TAAAAAAAAA (196) 18.5 0.0185 Adult retinal ACAGACTGTC (2) 1.9 0.0019 Adult retinal GGATTATAAG 1.9 0.0019 ONL TGGTTGCTGG (369) 398.4 0.3984 ONL TAAAAAAAAA (196) 28.7 0.0287 ONL GATGATAAAA (3) 3.8 0.0038 ONL ACAGACTGTC (2) 1.9 0.0019 ONL GGATTATAAG 1.9 0.0019 ONL TGTTTGATAT (6) 1.9 0.0019