Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.41840	Ppp3r1	protein phosphatase 3, regulatory subunit B, alpha isoform (calcineurin B, type I)	11		19058
Gene Ontology	calcium ion binding
Human Homolog	PPP3R1[protein phosphatase 3 (formerly 2B), regulatory subunit B, 19kDa, alpha isoform (calcineurin B, type I)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 102 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TTGTGAAATC 9.8 0.0098 P8 Cb GC TGCTCTGTTC (3) 8.2 0.0082 P8 Cb GC CCTTTAATCT (38) 4.9 0.0049 P8 Cb GC AAGCAACTAA (4) 3.3 0.0033 P8 Cb GC TGAAATACTT (2) 3.3 0.0033 P8 Cb GC TGCTCTGCTT (4) 1.6 0.0016 Cb medulloblastoma TTGTGAAATC 67.1 0.0671 Cb medulloblastoma TTGGAAAATG (4) 11.6 0.0116 Cb medulloblastoma CCCTCCCCAC (3) 6.9 0.0069 Cb medulloblastoma TACTGATCAG (3) 6.9 0.0069 Cb medulloblastoma TGAATACTGG (2) 2.3 0.0023 Cb medulloblastoma TGCTCTGTTC (3) 2.3 0.0023 P8 GC+1d culture TTGTGAAATC 13.7 0.0137 P8 GC+1d culture AAGCAACTAA (4) 5.7 0.0057 P8 GC+1d culture TGCTCTGTTC (3) 4.6 0.0046 P8 GC+1d culture TACTGATCAG (3) 2.3 0.0023 P8 GC+1d culture CCTTTAATCT (38) 1.1 0.0011 P8 GC+1d culture TGCTCTGCTT (4) 1.1 0.0011 P8 GC+SHH+1d culture TTGTGAAATC 23.4 0.0234 P8 GC+SHH+1d culture AAGCAACTAA (4) 3.5 0.0035 P8 GC+SHH+1d culture CCTTTAATCT (38) 3.5 0.0035 P8 GC+SHH+1d culture CCCTCCCCAC (3) 2.3 0.0023 P8 GC+SHH+1d culture TGAAATACTT (2) 2.3 0.0023 P8 GC+SHH+1d culture TGCTCTGTTC (3) 1.2 0.0012 3T3 fibroblasts TGCTCTGTTC (3) 14 0.014 3T3 fibroblasts CCTTTAATCT (38) 10.5 0.0105 3T3 fibroblasts AAGCAACTAA (4) 7 0.007 E15 cortex TGCTCTGTTC (3) 14.8 0.0148 E15 cortex TTGTGAAATC 9.9 0.0099 E15 cortex CCCTCCCCAC (3) 4.9 0.0049 E15 cortex TACTGATCAG (3) 4.9 0.0049 P1 cortex CCTTTAATCT (38) 4.5 0.0045 Hypothalamus TTGTGAAATC 25.4 0.0254 Hypothalamus CCCTCCCCAC (3) 12.7 0.0127 Hypothalamus AAGCAACTAA (4) 9.1 0.0091 Hypothalamus TACTGATCAG (3) 7.2 0.0072 Hypothalamus TGCTCTGCTT (4) 7.2 0.0072 Hypothalamus TTGGAAAATG (4) 5.4 0.0054 Hypothalamus TGCTCTGTTC (3) 3.6 0.0036 Hypothalamus CCTTTAATCT (38) 1.8 0.0018 Hypothalamus TGAAATACTT (2) 1.8 0.0018 E12.5 retina AAGCAACTAA (4) 7.5 0.0075 E12.5 retina TGCTCTGTTC (3) 7.5 0.0075 E12.5 retina TTGTGAAATC 3.8 0.0038 E12.5 retina CCTTTAATCT (38) 1.9 0.0019 E14.5 retina CCTTTAATCT (38) 12.8 0.0128 E14.5 retina TTGTGAAATC 12.8 0.0128 E14.5 retina CCCTCCCCAC (3) 1.8 0.0018 E14.5 retina TGAATACTGG (2) 1.8 0.0018 E16.5 retina TGCTCTGTTC (3) 7.2 0.0072 E16.5 retina TTGTGAAATC 5.4 0.0054 E16.5 retina CCCTCCCCAC (3) 1.8 0.0018 E16.5 retina TGAAATACTT (2) 1.8 0.0018 E16.5 retina TGAATACTGG (2) 1.8 0.0018 E18.5 retina AAGCAACTAA (4) 7.3 0.0073 E18.5 retina TTGTGAAATC 7.3 0.0073 E18.5 retina TGCTCTGTTC (3) 5.5 0.0055 E18.5 retina TTGGAAAATG (4) 1.8 0.0018 P0.5 retina CCCTCCCCAC (3) 5.9 0.0059 P0.5 retina TGCTCTGTTC (3) 5.9 0.0059 P0.5 retina TTGTGAAATC 5.9 0.0059 P0.5 retina AAGCAACTAA (4) 3.9 0.0039 P0.5 retina CCTTTAATCT (38) 2 0.002 P0.5 retina TGCTCTGCTT (4) 2 0.002 P2.5 retina AAGCAACTAA (4) 8.8 0.0088 P2.5 retina TTGTGAAATC 7 0.007 P2.5 retina CCCTCCCCAC (3) 3.5 0.0035 P2.5 retina CCTTTAATCT (38) 3.5 0.0035 P2.5 retina TACTGATCAG (3) 1.8 0.0018 P2.5 retina TTGGAAAATG (4) 1.8 0.0018 P4.5 retina TTGTGAAATC 9.9 0.0099 P4.5 retina AAGCAACTAA (4) 4 0.004 P4.5 retina CCTTTAATCT (38) 4 0.004 P6.5 retina TTGTGAAATC 13.3 0.0133 P6.5 retina CCTTTAATCT (38) 11.7 0.0117 P6.5 retina AAGCAACTAA (4) 3.3 0.0033 P6.5 retina TGAAATACTT (2) 1.7 0.0017 P10.5 crx- retina TGCTCTGTTC (3) 11.1 0.0111 P10.5 crx- retina TTGTGAAATC 11.1 0.0111 P10.5 crx- retina CCCTCCCCAC (3) 3.7 0.0037 P10.5 crx- retina TGAAATACTT (2) 1.9 0.0019 P10.5 crx+ retina TTGTGAAATC 21.1 0.0211 P10.5 crx+ retina CCCTCCCCAC (3) 11.5 0.0115 P10.5 crx+ retina AAGCAACTAA (4) 7.7 0.0077 P10.5 crx+ retina TGAAATACTT (2) 3.8 0.0038 P10.5 crx+ retina TGCTCTGCTT (4) 3.8 0.0038 P10.5 crx+ retina TGCTCTGTTC (3) 3.8 0.0038 P10.5 crx+ retina TTGGAAAATG (4) 3.8 0.0038 Adult retinal CCTTTAATCT (38) 7.4 0.0074 Adult retinal TTGTGAAATC 7.4 0.0074 Adult retinal CCCTCCCCAC (3) 3.7 0.0037 Adult retinal TGAAATACTT (2) 1.9 0.0019 Adult retinal TGCTCTGCTT (4) 1.9 0.0019 Adult retinal TGCTCTGTTC (3) 1.9 0.0019 Adult retinal TTGGAAAATG (4) 1.9 0.0019 ONL CCTTTAATCT (38) 11.5 0.0115 ONL TTGTGAAATC 11.5 0.0115 ONL AAGCAACTAA (4) 7.7 0.0077 ONL CCCTCCCCAC (3) 3.8 0.0038 ONL TGCTCTGTTC (3) 3.8 0.0038 ONL TGAAATACTT (2) 1.9 0.0019 ONL TGCTCTGCTT (4) 1.9 0.0019