| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AGGGCCATCC (2) CAAATTAAAA (2) CAAATTAACC (2) TAAGACCTTA (2) TCCTCTGGGG (2) TCTGTGTTAA TGTCTATTTG TTGTGGCGCT TTTCTATTTG
| 53.7 | 0.0537 |
| Cb medulloblastoma | AGGGCCATCC (2) TAAGACCTTA (2)
| 27.7 | 0.0277 |
| P8 GC+1d culture | AGGGCCATCC (2) AGTTGGGAAG (2) CAAATTAAAA (2) CAAATTAACC (2) TAAGACCTTA (2) TCCTCTGGGG (2) TGTCTATTTG
| 23.9 | 0.0239 |
| P8 GC+SHH+1d culture | AGGGCCATCC (2) AGTTGGGAAG (2) CAAATTAAAA (2) CAAATTAACC (2) TAAGACCTTA (2) TGTCTATTTG TTGTGGCGCT
| 48 | 0.048 |
| 3T3 fibroblasts | AGGGCCATCC (2) CAAATTAACC (2) TCCTCTGGGG (2) TCTGTGTTAA
| 24.5 | 0.0245 |
| E15 cortex | AGGGCCATCC (2) CAAATTAACC (2)
| 14.8 | 0.0148 |
| P1 cortex | CAAATTAAAA (2)
| 4.5 | 0.0045 |
| Hypothalamus | AGGGCCATCC (2) CAAATTAACC (2) TAAGACCTTA (2)
| 23.5 | 0.0235 |
| E12.5 retina | CAAATTAAAA (2) CAAATTAACC (2) TCCTCTGGGG (2) TGTCTATTTG
| 39.4 | 0.0394 |
| E14.5 retina | AGGGCCATCC (2) AGTTGGGAAG (2) CAAATTAAAA (2) CAAATTAACC (2) TAAGACCTTA (2) TCCTCTGGGG (2) TGTCTATTTG TTGTGGCGCT
| 43.6 | 0.0436 |
| E16.5 retina | AGTTGGGAAG (2) CAAATTAAAA (2) CAAATTAACC (2) TAAGACCTTA (2) TACAAAAGAT (2) TGTCTATTTG
| 54.3 | 0.0543 |
| E18.5 retina | CAAATTAAAA (2) CAAATTAACC (2) TAAGACCTTA (2) TACAAAAGAT (2) TGTCTATTTG
| 65.5 | 0.0655 |
| P0.5 retina | AGGGCCATCC (2) CAAATTAAAA (2) CAAATTAACC (2) TAAGACCTTA (2) TACAAAAGAT (2) TCCTCTGGGG (2) TGTCTATTTG
| 39.4 | 0.0394 |
| P2.5 retina | AGGGCCATCC (2) CAAATTAAAA (2) CAAATTAACC (2) TGTCTATTTG
| 44 | 0.044 |
| P4.5 retina | AGGGCCATCC (2) CAAATTAAAA (2) CAAATTAACC (2) TAAGACCTTA (2) TGTCTATTTG TTTCTATTTG
| 39.7 | 0.0397 |
| P6.5 retina | AGGGCCATCC (2) AGTTGGGAAG (2) CAAATTAAAA (2) CAAATTAACC (2) TACAAAAGAT (2)
| 11.8 | 0.0118 |
| P10.5 crx- retina | AGGGCCATCC (2) TAAGACCTTA (2) TGTCTATTTG
| 13.1 | 0.0131 |
| P10.5 crx+ retina | AGGGCCATCC (2) CAAATTAACC (2)
| 5.7 | 0.0057 |
| Adult retinal | AGGGCCATCC (2) CAAATTAACC (2) TAAGACCTTA (2) TCCTCTGGGG (2) TTGTGGCGCT
| 14.9 | 0.0149 |
| ONL | CAAATTAAAA (2) TAAGACCTTA (2) TACAAAAGAT (2) TCTGTGTTAA
| 9.5 | 0.0095 |