Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.41977	Taf1c	TATA box binding protein (Tbp)-associated factor, RNA polymerase I, C	8		21341
Gene Ontology	protein binding | RNA polymerase I transcription factor complex | transcription from Pol I promoter | transcription regulator activity
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 88 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AGCAGATGGT CCAGGGGCCT GTAAAAAAAA (2) TGGCCCAAAA (2) TGGTTGTTGG (2) 70.2 0.0702 Cb medulloblastoma AGCAGATGGT ATGCTTTGCT CCAGGGGCCT GTAAAAAAAA (2) 147.9 0.1479 P8 GC+1d culture AGCAGATGGT GTAAAAAAAA (2) TGGCCCAAAA (2) TGGTTGTTGG (2) 84.5 0.0845 P8 GC+SHH+1d culture AGCAGATGGT GTAAAAAAAA (2) TGGCCCAAAA (2) TGGTTGTTGG (2) 140.5 0.1405 3T3 fibroblasts CCAGGGGCCT GTAAAAAAAA (2) TGGCCCAAAA (2) 14 0.014 E15 cortex CCAGGGGCCT GTAAAAAAAA (2) TGGTTGTTGG (2) 44.4 0.0444 P1 cortex AGCAGATGGT GGCACACTGC (2) GTAAAAAAAA (2) TGGTGCTGAC TGGTTGTTGG (2) 59 0.059 Hypothalamus CCAGGGGCCT GTAAAAAAAA (2) TGGCCCAAAA (2) TGGTTGTTGG (2) 124.9 0.1249 E12.5 retina AGCAGATGGT GTAAAAAAAA (2) TGGTTGTTGG (2) 56.3 0.0563 E14.5 retina AGCAGATGGT CCAGGGGCCT GTAAAAAAAA (2) TGGTTGTTGG (2) 125.7 0.1257 E16.5 retina AGCAGATGGT GGCACACTGC (2) GTAAAAAAAA (2) TGCTCCCCGA TGGTTGTTGG (2) 103.2 0.1032 E18.5 retina AGCAGATGGT GTAAAAAAAA (2) TGGTTGTTGG (2) 202 0.202 P0.5 retina AGCAGATGGT CCAGGGGCCT GTAAAAAAAA (2) TGCTCCCCGA TGGCCCAAAA (2) 62.8 0.0628 P2.5 retina AGCAGATGGT GTAAAAAAAA (2) TGGCCCAAAA (2) TGGTGCTGAC TGGTTGTTGG (2) 117.9 0.1179 P4.5 retina AGCAGATGGT CCAGGGGCCT GTAAAAAAAA (2) TGGCCCAAAA (2) TGGTTGTTGG (2) 174.4 0.1744 P6.5 retina AGCAGATGGT CCAGGGGCCT GTAAAAAAAA (2) TGGTTGTTGG (2) 83.4 0.0834 P10.5 crx- retina AGCAGATGGT ATGCTTTGCT CCAGGGGCCT GTAAAAAAAA (2) TGCTCCCCGA TGGTTGTTGG (2) 41 0.041 P10.5 crx+ retina AGCAGATGGT ATGCTTTGCT CCAGGGGCCT GTAAAAAAAA (2) TGCTCCCCGA TGGCCCAAAA (2) TGGTTGTTGG (2) 71 0.071 Adult retinal AGCAGATGGT CCAGGGGCCT GTAAAAAAAA (2) TGGTTGTTGG (2) 37.1 0.0371 ONL CCAGGGGCCT GTAAAAAAAA (2) TGGCCCAAAA (2) TGGTGCTGAC TGGTTGTTGG (2) 44 0.044