Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.42249	2610028H22Rik	RIKEN cDNA 2610028H22 gene	9		78386
Mm.42249	D930014N22Rik	RIKEN cDNA D930014N22 gene	9		320689
Mm.42249	Neo1	neogenin	9		18007
Gene Ontology	ATP binding | cell adhesion | integral to membrane | protein amino acid phosphorylation | protein binding | vascular endothelial growth factor receptor activity
Human Homolog	NEO1[neogenin homolog 1 (chicken)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 47 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TTTTTATTTT (4) 13.1 0.0131 P8 Cb GC TTGCATTGCT (4) 11.4 0.0114 P8 Cb GC GAAAAAGGAA (4) 3.3 0.0033 Cb medulloblastoma TTTTTATTTT (4) 4.6 0.0046 Cb medulloblastoma GGGCGGGAAG (4) 2.3 0.0023 Cb medulloblastoma TTGCATTGCT (4) 2.3 0.0023 P8 GC+1d culture TTTTTATTTT (4) 9.1 0.0091 P8 GC+1d culture TTGCATTGCT (4) 8 0.008 P8 GC+1d culture GGGCGGGAAG (4) 3.4 0.0034 P8 GC+SHH+1d culture TTGCATTGCT (4) 16.4 0.0164 P8 GC+SHH+1d culture TTTTTATTTT (4) 10.5 0.0105 P8 GC+SHH+1d culture GGGCGGGAAG (4) 2.3 0.0023 E15 cortex TTGCATTGCT (4) 4.9 0.0049 P1 cortex GAAAAAGGAA (4) 9.1 0.0091 P1 cortex TTGCATTGCT (4) 9.1 0.0091 P1 cortex GGAATAAACA (4) 4.5 0.0045 Hypothalamus TTGCATTGCT (4) 5.4 0.0054 Hypothalamus TTTTTATTTT (4) 5.4 0.0054 E12.5 retina TTGCATTGCT (4) 1.9 0.0019 E12.5 retina TTTTTATTTT (4) 1.9 0.0019 E14.5 retina GGAATAAACA (4) 1.8 0.0018 E14.5 retina TTTTTATTTT (4) 1.8 0.0018 E16.5 retina TTTTTATTTT (4) 3.6 0.0036 E16.5 retina GGGCGGGAAG (4) 1.8 0.0018 E16.5 retina TTGCATTGCT (4) 1.8 0.0018 E18.5 retina TTTTTATTTT (4) 3.6 0.0036 E18.5 retina GGAAGGAGTG (4) 1.8 0.0018 P0.5 retina TTGCATTGCT (4) 2 0.002 P0.5 retina TTTTTATTTT (4) 2 0.002 P2.5 retina TTGCATTGCT (4) 7 0.007 P2.5 retina TTTTTATTTT (4) 5.3 0.0053 P2.5 retina GGGCGGGAAG (4) 1.8 0.0018 P4.5 retina TTTTTATTTT (4) 4 0.004 P4.5 retina GGAAGGAGTG (4) 2 0.002 P4.5 retina GGAATAAACA (4) 2 0.002 P4.5 retina TTGCATTGCT (4) 2 0.002 P6.5 retina TTTTTATTTT (4) 5 0.005 P6.5 retina TTGCATTGCT (4) 1.7 0.0017 P10.5 crx- retina TTGCATTGCT (4) 7.4 0.0074 P10.5 crx- retina TTTTTATTTT (4) 3.7 0.0037 P10.5 crx- retina GGAAGGAGTG (4) 1.9 0.0019 P10.5 crx+ retina TTTTTATTTT (4) 5.8 0.0058 P10.5 crx+ retina GGGCGGGAAG (4) 1.9 0.0019 P10.5 crx+ retina TTGCATTGCT (4) 1.9 0.0019 Adult retinal TTTTTATTTT (4) 3.7 0.0037 ONL GGAAGGAGTG (4) 1.9 0.0019 ONL TTTTTATTTT (4) 1.9 0.0019