Mouse Retina SAGE Library    [Home]    [Libraries]    [Images]

Gene:              Accession:    
e.g., Rho or Rhodopsin e.g., BG297543 batch search
Tag:        Cytoband (Mm):    
e.g., CCCAGTTCAC e.g., 6 E3
Unigene:        Cytoband (Hs):    
e.g., Mm.2965 batch search e.g., 3q21-q24


 UniGene  Symbol  Name  Chr  Cytoband  LocusLink 
 Mm.4263 Cst3cystatin C 2  2 84.0 cM  13010 
 Gene Ontology cysteine protease inhibitor activity | extracellular space
 Human Homolog CST3[cystatin C (amyloid angiopathy and cerebral hemorrhage)]
 Clusters 
   Neighbors    

No In Situ Hybridization images could be found.



SAGE Tags

Total 164 tags found with positive counts.

  all tags    reliable tags    sum by library with all tags    sum by library with reliable tags  
 Library  Tag (Other Genes)  Normalized Count  % in library 
P8 Cb GCAAAAAAAAAA (658)203.90.2039
P8 Cb GCCCTTGCTCAA (2)70.10.0701
P8 Cb GCCAGACTTGTT (2)4.90.0049
P8 Cb GCCAGATGGTTC (4)1.60.0016
P8 Cb GCGCACAACCTG (2)1.60.0016
P8 Cb GCGTTGGCTAGG1.60.0016
P8 Cb GCTAGTTCGGCC1.60.0016
Cb medulloblastomaAAAAAAAAAA (658)797.80.7978
Cb medulloblastomaCCTTGCTCAA (2)171.10.1711
Cb medulloblastomaGTTGGCTAGG6.90.0069
Cb medulloblastomaCAGATGGTTC (4)2.30.0023
Cb medulloblastomaCCCTTGCTCA2.30.0023
Cb medulloblastomaCCTTGGTCAA (2)2.30.0023
Cb medulloblastomaGCCAGCCCGC2.30.0023
Cb medulloblastomaTAGTTCGGCC2.30.0023
P8 GC+1d cultureAAAAAAAAAA (658)204.30.2043
P8 GC+1d cultureCCTTGCTCAA (2)58.20.0582
P8 GC+1d cultureCAGATGGTTC (4)3.40.0034
P8 GC+1d cultureGTTGGCTAGG2.30.0023
P8 GC+1d cultureCAGACTGTTC (3)1.10.0011
P8 GC+1d cultureCCTTGCTCAG (3)1.10.0011
P8 GC+1d cultureCCTTGGTCAA (2)1.10.0011
P8 GC+1d cultureGAAAGGACAG (3)1.10.0011
P8 GC+SHH+1d cultureAAAAAAAAAA (658)278.70.2787
P8 GC+SHH+1d cultureCCTTGCTCAA (2)79.60.0796
P8 GC+SHH+1d cultureCAGATGGTTC (4)5.90.0059
P8 GC+SHH+1d cultureGGAAAAAGGA (12)2.30.0023
P8 GC+SHH+1d cultureGTTGGCTAGG2.30.0023
P8 GC+SHH+1d cultureATCCTTCTAG1.20.0012
P8 GC+SHH+1d cultureCAGACTTGTT (2)1.20.0012
P8 GC+SHH+1d cultureCCTTGTTCAA1.20.0012
P8 GC+SHH+1d cultureTAGTTCGGCC1.20.0012
3T3 fibroblastsCCTTGCTCAA (2)119.20.1192
3T3 fibroblastsAAAAAAAAAA (658)280.028
3T3 fibroblastsGTTGGCTAGG70.007
3T3 fibroblastsACCAGCCCCA (2)3.50.0035
3T3 fibroblastsCAGACTTGTT (2)3.50.0035
3T3 fibroblastsCCTTGCTCAG (3)3.50.0035
3T3 fibroblastsTAGTTCGGCC3.50.0035
E15 cortexAAAAAAAAAA (658)212.80.2128
E15 cortexCCTTGCTCAA (2)24.70.0247
E15 cortexCAAACTGTTC4.90.0049
E15 cortexCAGATGGTTC (4)4.90.0049
P1 cortexAAAAAAAAAA (658)245.40.2454
P1 cortexCCTTGCTCAA (2)45.50.0455
P1 cortexCAGATGGTTC (4)9.10.0091
P1 cortexATCCTTCTAG4.50.0045
P1 cortexCAGACTTGTT (2)4.50.0045
P1 cortexCCTTTGCTTC (5)4.50.0045
P1 cortexGTTGGCTAGG4.50.0045
HypothalamusCCTTGCTCAA (2)273.50.2735
HypothalamusAAAAAAAAAA (658)123.20.1232
HypothalamusTAGTTCGGCC30.80.0308
HypothalamusCAGACTGTTC (3)25.40.0254
HypothalamusACCAGCCCCA (2)7.20.0072
HypothalamusCCTTTGCTTC (5)5.40.0054
HypothalamusATCCTTCTAG3.60.0036
HypothalamusCAGACTTGTT (2)3.60.0036
HypothalamusCAGATGGTTC (4)3.60.0036
HypothalamusGTTGGCTAGG3.60.0036
HypothalamusCCTTGGTCAA (2)1.80.0018
HypothalamusCCTTGTTCAA1.80.0018
HypothalamusGAAAGGACAG (3)1.80.0018
HypothalamusGCCAGCCCGC1.80.0018
E12.5 retinaAAAAAAAAAA (658)138.90.1389
E12.5 retinaCCTTGCTCAA (2)41.30.0413
E12.5 retinaCAGACTTGTT (2)5.60.0056
E12.5 retinaTATCCCCTAG1.90.0019
E14.5 retinaAAAAAAAAAA (658)94.70.0947
E14.5 retinaCCTTGCTCAA (2)27.30.0273
E14.5 retinaCAGACTGTTC (3)3.60.0036
E14.5 retinaATCCTTCTAG1.80.0018
E14.5 retinaCAGACTTGTT (2)1.80.0018
E14.5 retinaCAGATGGTTC (4)1.80.0018
E14.5 retinaGGAAAAAGGA (12)1.80.0018
E14.5 retinaGTTGGCTAGG1.80.0018
E14.5 retinaTACCAAGTCC (2)1.80.0018
E14.5 retinaTAGTTCGGCC1.80.0018
E16.5 retinaCCTTGCTCAA (2)63.40.0634
E16.5 retinaAAAAAAAAAA (658)43.50.0435
E16.5 retinaTAGTTCGGCC5.40.0054
E16.5 retinaCAGATGGTTC (4)3.60.0036
E16.5 retinaAACCTTCTAT (4)1.80.0018
E16.5 retinaCAGACTGTTC (3)1.80.0018
E16.5 retinaTACCAAGTCC (2)1.80.0018
E16.5 retinaTATCCCCTAG1.80.0018
E18.5 retinaAAAAAAAAAA (658)374.70.3747
E18.5 retinaCCTTGCTCAA (2)43.70.0437
E18.5 retinaCAGACTTGTT (2)5.50.0055
E18.5 retinaTAGTTCGGCC5.50.0055
E18.5 retinaCAGATGGTTC (4)1.80.0018
E18.5 retinaGAAAGGACAG (3)1.80.0018
E18.5 retinaTACCAAGTCC (2)1.80.0018
P0.5 retinaAAAAAAAAAA (658)117.80.1178
P0.5 retinaCCTTGCTCAA (2)43.20.0432
P0.5 retinaCAGACTGTTC (3)20.002
P0.5 retinaCAGACTTGTT (2)20.002
P0.5 retinaCAGATGGTTC (4)20.002
P2.5 retinaAAAAAAAAAA (658)329.10.3291
P2.5 retinaCCTTGCTCAA (2)98.50.0985
P2.5 retinaCAGATGGTTC (4)70.007
P2.5 retinaATCCTTCTAG1.80.0018
P2.5 retinaCAAACTGTTC1.80.0018
P2.5 retinaCAGACTTGTT (2)1.80.0018
P2.5 retinaCCTTGCTCAG (3)1.80.0018
P2.5 retinaGTTGGCTAGG1.80.0018
P2.5 retinaTAGTTCGGCC1.80.0018
P4.5 retinaAAAAAAAAAA (658)283.30.2833
P4.5 retinaCCTTGCTCAA (2)1110.111
P4.5 retinaCAGACTTGTT (2)7.90.0079
P4.5 retinaTAGTTCGGCC5.90.0059
P4.5 retinaCCTTGTTCAA40.004
P4.5 retinaATCCTTCTAG20.002
P4.5 retinaCAAACTGTTC20.002
P4.5 retinaCCCTTGCTCA20.002
P4.5 retinaGAAAGGACAG (3)20.002
P6.5 retinaAAAAAAAAAA (658)266.80.2668
P6.5 retinaCCTTGCTCAA (2)173.40.1734
P6.5 retinaCAGACTTGTT (2)6.70.0067
P6.5 retinaTAGTTCGGCC50.005
P6.5 retinaAACCTTCTAT (4)1.70.0017
P6.5 retinaCAGATGGTTC (4)1.70.0017
P6.5 retinaCCTTTGCTCA (2)1.70.0017
P6.5 retinaGTTGGCTAGG1.70.0017
P6.5 retinaTATCCCCTAG1.70.0017
P10.5 crx- retinaCCTTGCTCAA (2)1300.13
P10.5 crx- retinaAAAAAAAAAA (658)44.60.0446
P10.5 crx- retinaCAGATGGTTC (4)11.10.0111
P10.5 crx- retinaCAGACTTGTT (2)9.30.0093
P10.5 crx- retinaGCCAGCCCGC9.30.0093
P10.5 crx- retinaTAGTTCGGCC9.30.0093
P10.5 crx- retinaACCAGCCCCA (2)3.70.0037
P10.5 crx- retinaGCACAACCTG (2)3.70.0037
P10.5 crx- retinaGTTGGCTAGG3.70.0037
P10.5 crx+ retinaCCTTGCTCAA (2)203.80.2038
P10.5 crx+ retinaAAAAAAAAAA (658)96.10.0961
P10.5 crx+ retinaCAGATGGTTC (4)9.60.0096
P10.5 crx+ retinaTAGTTCGGCC9.60.0096
P10.5 crx+ retinaCAGACTTGTT (2)3.80.0038
P10.5 crx+ retinaGTTGGCTAGG3.80.0038
P10.5 crx+ retinaAACCTTCTAT (4)1.90.0019
P10.5 crx+ retinaACCAGCCCCA (2)1.90.0019
P10.5 crx+ retinaCAAACTGTTC1.90.0019
P10.5 crx+ retinaCCCTTGCTCA1.90.0019
P10.5 crx+ retinaGCACAACCTG (2)1.90.0019
Adult retinalCCTTGCTCAA (2)181.50.1815
Adult retinalAAAAAAAAAA (658)57.40.0574
Adult retinalCAGATGGTTC (4)7.40.0074
Adult retinalTAGTTCGGCC5.60.0056
Adult retinalACCAGCCCCA (2)1.90.0019
Adult retinalCAAACTGTTC1.90.0019
Adult retinalCAGACTTGTT (2)1.90.0019
Adult retinalCCTTTGCTCA (2)1.90.0019
Adult retinalGTTGGCTAGG1.90.0019
ONLCCTTGCTCAA (2)143.70.1437
ONLAAAAAAAAAA (658)103.40.1034
ONLCAGACTGTTC (3)7.70.0077
ONLAACCTTCTAT (4)3.80.0038
ONLATCCTTCTAG3.80.0038
ONLCCTTGGTCAA (2)3.80.0038
ONLCCTTTGCTCA (2)1.90.0019
ONLGCACAACCTG (2)1.90.0019
ONLGCCAGCCCGC1.90.0019
ONLGTTGGCTAGG1.90.0019