Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.4263	Cst3	cystatin C	2	2 84.0 cM	13010
Gene Ontology	cysteine protease inhibitor activity | extracellular space
Human Homolog	CST3[cystatin C (amyloid angiopathy and cerebral hemorrhage)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 91 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCTTGCTCAA 70.1 0.0701 P8 Cb GC GTTGGCTAGG 1.6 0.0016 P8 Cb GC TAGTTCGGCC 1.6 0.0016 Cb medulloblastoma CCTTGCTCAA 171.1 0.1711 Cb medulloblastoma GTTGGCTAGG 6.9 0.0069 Cb medulloblastoma CCCTTGCTCA 2.3 0.0023 Cb medulloblastoma CCTTGGTCAA 2.3 0.0023 Cb medulloblastoma GCCAGCCCGC 2.3 0.0023 Cb medulloblastoma TAGTTCGGCC 2.3 0.0023 P8 GC+1d culture CCTTGCTCAA 58.2 0.0582 P8 GC+1d culture GTTGGCTAGG 2.3 0.0023 P8 GC+1d culture CAGACTGTTC (2) 1.1 0.0011 P8 GC+1d culture CCTTGGTCAA 1.1 0.0011 P8 GC+1d culture GAAAGGACAG (2) 1.1 0.0011 P8 GC+SHH+1d culture CCTTGCTCAA 79.6 0.0796 P8 GC+SHH+1d culture GTTGGCTAGG 2.3 0.0023 P8 GC+SHH+1d culture CCTTGTTCAA 1.2 0.0012 P8 GC+SHH+1d culture TAGTTCGGCC 1.2 0.0012 3T3 fibroblasts CCTTGCTCAA 119.2 0.1192 3T3 fibroblasts GTTGGCTAGG 7 0.007 3T3 fibroblasts ACCAGCCCCA 3.5 0.0035 3T3 fibroblasts TAGTTCGGCC 3.5 0.0035 E15 cortex CCTTGCTCAA 24.7 0.0247 E15 cortex CAAACTGTTC 4.9 0.0049 P1 cortex CCTTGCTCAA 45.5 0.0455 P1 cortex GTTGGCTAGG 4.5 0.0045 Hypothalamus CCTTGCTCAA 273.5 0.2735 Hypothalamus TAGTTCGGCC 30.8 0.0308 Hypothalamus CAGACTGTTC (2) 25.4 0.0254 Hypothalamus ACCAGCCCCA 7.2 0.0072 Hypothalamus GTTGGCTAGG 3.6 0.0036 Hypothalamus CCTTGGTCAA 1.8 0.0018 Hypothalamus CCTTGTTCAA 1.8 0.0018 Hypothalamus GAAAGGACAG (2) 1.8 0.0018 Hypothalamus GCCAGCCCGC 1.8 0.0018 E12.5 retina CCTTGCTCAA 41.3 0.0413 E12.5 retina TATCCCCTAG 1.9 0.0019 E14.5 retina CCTTGCTCAA 27.3 0.0273 E14.5 retina CAGACTGTTC (2) 3.6 0.0036 E14.5 retina GTTGGCTAGG 1.8 0.0018 E14.5 retina TACCAAGTCC 1.8 0.0018 E14.5 retina TAGTTCGGCC 1.8 0.0018 E16.5 retina CCTTGCTCAA 63.4 0.0634 E16.5 retina TAGTTCGGCC 5.4 0.0054 E16.5 retina CAGACTGTTC (2) 1.8 0.0018 E16.5 retina TACCAAGTCC 1.8 0.0018 E16.5 retina TATCCCCTAG 1.8 0.0018 E18.5 retina CCTTGCTCAA 43.7 0.0437 E18.5 retina TAGTTCGGCC 5.5 0.0055 E18.5 retina GAAAGGACAG (2) 1.8 0.0018 E18.5 retina TACCAAGTCC 1.8 0.0018 P0.5 retina CCTTGCTCAA 43.2 0.0432 P0.5 retina CAGACTGTTC (2) 2 0.002 P2.5 retina CCTTGCTCAA 98.5 0.0985 P2.5 retina CAAACTGTTC 1.8 0.0018 P2.5 retina GTTGGCTAGG 1.8 0.0018 P2.5 retina TAGTTCGGCC 1.8 0.0018 P4.5 retina CCTTGCTCAA 111 0.111 P4.5 retina TAGTTCGGCC 5.9 0.0059 P4.5 retina CCTTGTTCAA 4 0.004 P4.5 retina CAAACTGTTC 2 0.002 P4.5 retina CCCTTGCTCA 2 0.002 P4.5 retina GAAAGGACAG (2) 2 0.002 P6.5 retina CCTTGCTCAA 173.4 0.1734 P6.5 retina TAGTTCGGCC 5 0.005 P6.5 retina CCTTTGCTCA (2) 1.7 0.0017 P6.5 retina GTTGGCTAGG 1.7 0.0017 P6.5 retina TATCCCCTAG 1.7 0.0017 P10.5 crx- retina CCTTGCTCAA 130 0.13 P10.5 crx- retina GCCAGCCCGC 9.3 0.0093 P10.5 crx- retina TAGTTCGGCC 9.3 0.0093 P10.5 crx- retina ACCAGCCCCA 3.7 0.0037 P10.5 crx- retina GTTGGCTAGG 3.7 0.0037 P10.5 crx+ retina CCTTGCTCAA 203.8 0.2038 P10.5 crx+ retina TAGTTCGGCC 9.6 0.0096 P10.5 crx+ retina GTTGGCTAGG 3.8 0.0038 P10.5 crx+ retina ACCAGCCCCA 1.9 0.0019 P10.5 crx+ retina CAAACTGTTC 1.9 0.0019 P10.5 crx+ retina CCCTTGCTCA 1.9 0.0019 Adult retinal CCTTGCTCAA 181.5 0.1815 Adult retinal TAGTTCGGCC 5.6 0.0056 Adult retinal ACCAGCCCCA 1.9 0.0019 Adult retinal CAAACTGTTC 1.9 0.0019 Adult retinal CCTTTGCTCA (2) 1.9 0.0019 Adult retinal GTTGGCTAGG 1.9 0.0019 ONL CCTTGCTCAA 143.7 0.1437 ONL CAGACTGTTC (2) 7.7 0.0077 ONL CCTTGGTCAA 3.8 0.0038 ONL CCTTTGCTCA (2) 1.9 0.0019 ONL GCCAGCCCGC 1.9 0.0019 ONL GTTGGCTAGG 1.9 0.0019