Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.4263	Cst3	cystatin C	2	2 84.0 cM	13010
Gene Ontology	cysteine protease inhibitor activity | extracellular space
Human Homolog	CST3[cystatin C (amyloid angiopathy and cerebral hemorrhage)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 164 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAAAAAAAA (2) CAGACTTGTT CAGATGGTTC CCTTGCTCAA GCACAACCTG GTTGGCTAGG TAGTTCGGCC 285.3 0.2853 Cb medulloblastoma AAAAAAAAAA (2) CAGATGGTTC CCCTTGCTCA CCTTGCTCAA CCTTGGTCAA GCCAGCCCGC GTTGGCTAGG TAGTTCGGCC 987.3 0.9873 P8 GC+1d culture AAAAAAAAAA (2) CAGACTGTTC (2) CAGATGGTTC CCTTGCTCAA CCTTGCTCAG CCTTGGTCAA GAAAGGACAG (2) GTTGGCTAGG 272.6 0.2726 P8 GC+SHH+1d culture AAAAAAAAAA (2) ATCCTTCTAG CAGACTTGTT CAGATGGTTC CCTTGCTCAA CCTTGTTCAA GGAAAAAGGA (2) GTTGGCTAGG TAGTTCGGCC 373.6 0.3736 3T3 fibroblasts AAAAAAAAAA (2) ACCAGCCCCA CAGACTTGTT CCTTGCTCAA CCTTGCTCAG GTTGGCTAGG TAGTTCGGCC 168.2 0.1682 E15 cortex AAAAAAAAAA (2) CAAACTGTTC CAGATGGTTC CCTTGCTCAA 247.3 0.2473 P1 cortex AAAAAAAAAA (2) ATCCTTCTAG CAGACTTGTT CAGATGGTTC CCTTGCTCAA CCTTTGCTTC GTTGGCTAGG 318 0.318 Hypothalamus AAAAAAAAAA (2) ACCAGCCCCA ATCCTTCTAG CAGACTGTTC (2) CAGACTTGTT CAGATGGTTC CCTTGCTCAA CCTTGGTCAA CCTTGTTCAA CCTTTGCTTC GAAAGGACAG (2) GCCAGCCCGC GTTGGCTAGG TAGTTCGGCC 487.1 0.4871 E12.5 retina AAAAAAAAAA (2) CAGACTTGTT CCTTGCTCAA TATCCCCTAG 187.7 0.1877 E14.5 retina AAAAAAAAAA (2) ATCCTTCTAG CAGACTGTTC (2) CAGACTTGTT CAGATGGTTC CCTTGCTCAA GGAAAAAGGA (2) GTTGGCTAGG TACCAAGTCC TAGTTCGGCC 138.2 0.1382 E16.5 retina AAAAAAAAAA (2) AACCTTCTAT CAGACTGTTC (2) CAGATGGTTC CCTTGCTCAA TACCAAGTCC TAGTTCGGCC TATCCCCTAG 123.1 0.1231 E18.5 retina AAAAAAAAAA (2) CAGACTTGTT CAGATGGTTC CCTTGCTCAA GAAAGGACAG (2) TACCAAGTCC TAGTTCGGCC 434.8 0.4348 P0.5 retina AAAAAAAAAA (2) CAGACTGTTC (2) CAGACTTGTT CAGATGGTTC CCTTGCTCAA 167 0.167 P2.5 retina AAAAAAAAAA (2) ATCCTTCTAG CAAACTGTTC CAGACTTGTT CAGATGGTTC CCTTGCTCAA CCTTGCTCAG GTTGGCTAGG TAGTTCGGCC 445.4 0.4454 P4.5 retina AAAAAAAAAA (2) ATCCTTCTAG CAAACTGTTC CAGACTTGTT CCCTTGCTCA CCTTGCTCAA CCTTGTTCAA GAAAGGACAG (2) TAGTTCGGCC 420.1 0.4201 P6.5 retina AAAAAAAAAA (2) AACCTTCTAT CAGACTTGTT CAGATGGTTC CCTTGCTCAA CCTTTGCTCA (2) GTTGGCTAGG TAGTTCGGCC TATCCCCTAG 460.4 0.4604 P10.5 crx- retina AAAAAAAAAA (2) ACCAGCCCCA CAGACTTGTT CAGATGGTTC CCTTGCTCAA GCACAACCTG GCCAGCCCGC GTTGGCTAGG TAGTTCGGCC 224.7 0.2247 P10.5 crx+ retina AAAAAAAAAA (2) AACCTTCTAT ACCAGCCCCA CAAACTGTTC CAGACTTGTT CAGATGGTTC CCCTTGCTCA CCTTGCTCAA GCACAACCTG GTTGGCTAGG TAGTTCGGCC 336.2 0.3362 Adult retinal AAAAAAAAAA (2) ACCAGCCCCA CAAACTGTTC CAGACTTGTT CAGATGGTTC CCTTGCTCAA CCTTTGCTCA (2) GTTGGCTAGG TAGTTCGGCC 261.4 0.2614 ONL AAAAAAAAAA (2) AACCTTCTAT ATCCTTCTAG CAGACTGTTC (2) CCTTGCTCAA CCTTGGTCAA CCTTTGCTCA (2) GCACAACCTG GCCAGCCCGC GTTGGCTAGG 273.8 0.2738