Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.42944	Skp1a	S-phase kinase-associated protein 1A	11	11 31.0 cM	21402
Gene Ontology	kinase activity | protein binding | SCF ubiquitin ligase complex | translation elongation factor activity
Human Homolog	SKP1A[S-phase kinase-associated protein 1A (p19A)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 123 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CAAGACTGTG TAAAAATTAA (2) TGGGTGTCTT TGGTCCCAGT TGTAGTTCCA TTATTTCTTC (2) TTGGGTGGAT (2) 57.1 0.0571 Cb medulloblastoma AAGTAAGTGT CAAGACTGTG TAAAAATTAA (2) TGGGTGTCTT TGGTAGTTCC (4) TGTAGTTCCA TTGGGTGGAT (2) 69.4 0.0694 P8 GC+1d culture AAGTAAGTGT CAAGACTGTG TAAAAATTAA (2) TGGGTGTCTT TGGTAGTTCC (4) TGTAGTTCCA TTGGGTGGAT (2) 53.5 0.0535 P8 GC+SHH+1d culture AAGTAAGTGT CAAGACTGTG TAAAAATTAA (2) TGGGTGTCTT TGGTAGTTCC (4) TGTAGTTCCA TTATTTCTTC (2) TTGGGTGGAT (2) 55.1 0.0551 3T3 fibroblasts AAGTAAGTGT TGGGTGTCTT TGGTAGTTCC (4) 49.1 0.0491 E15 cortex AAGTAAGTGT TAAAAATTAA (2) TGGGTGTCTT TGGTAGTTCC (4) TGTAGTTCCA 39.4 0.0394 P1 cortex AAGTAAGTGT TGGGTGTCTT TGTAGTTCCA 45.4 0.0454 Hypothalamus AAGTAAGTGT TAAAAATTAA (2) TGGGTGTCTT TGGTAGTTCC (4) TGTAGTTCCA TTGGGTGGAT (2) 65.1 0.0651 E12.5 retina AAGTAAGTGT CTGGAAGAAA CTGGAAGATT TGGGTGTCTT TGTAGTTCCA TTGGGTGGAT (2) 39.5 0.0395 E14.5 retina AAGTAAGTGT TAAAAATTAA (2) TGGGTGTCTT TGGTAGTTCC (4) TGTAGTTCCA TTATTTCTTC (2) 25.4 0.0254 E16.5 retina AAGTAAGTGT TAAAAATTAA (2) TGGGTGTCTT TGGTAGTTCC (4) TGTAGTTCCA TTATTTCTTC (2) TTGGGTGGAT (2) 30.7 0.0307 E18.5 retina AAGTAAGTGT CAAGACTGTG CTGGAAGATT TAAAAATTAA (2) TGGGTGTCTT TGGTAGTTCC (4) TGGTCCCAGT TGTAGTTCCA TTATTTCTTC (2) 52.6 0.0526 P0.5 retina AAGTAAGTGT CAAGACTGTG CTGGAAGAAA TGGGTGTCTT TGGTAGTTCC (4) TGTAGTTCCA TTATTTCTTC (2) 41.4 0.0414 P2.5 retina AAGTAAGTGT CAAGACTGTG TAAAAATTAA (2) TGGGTGTCTT TGGTAGTTCC (4) TGGTCCCAGT TGTAGTTCCA TTATTTCTTC (2) 38.9 0.0389 P4.5 retina AAGTAAGTGT CAAGACTGTG TAAAAATTAA (2) TGGGTGTCTT TGGTAGTTCC (4) TGTAGTTCCA 41.7 0.0417 P6.5 retina CAAGACTGTG TAAAAATTAA (2) TGGGTGTCTT TGTAGTTCCA TTATTTCTTC (2) TTTGGTTGAT (3) 25.1 0.0251 P10.5 crx- retina AAGTAAGTGT CTGGAAGATT TAAAAATTAA (2) TGGGTGTCTT TGGTAGTTCC (4) TGTAGTTCCA TTGGGTGGAT (2) 35.4 0.0354 P10.5 crx+ retina AAGTAAGTGT TGGGTGTCTT TGGTAGTTCC (4) TGTAGTTCCA TTGGGTGGAT (2) TTTGGTTGAT (3) 53.8 0.0538 Adult retinal AAGTAAGTGT TGGGTGTCTT TGTAGTTCCA TTATTTCTTC (2) TTTGGTTGAT (3) 20.6 0.0206 ONL CTGGAAGAAA TGGGTGTCTT TGTAGTTCCA TTGGGTGGAT (2) 20.9 0.0209