Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.4312	Slc9a1	solute carrier family 9 (sodium/hydrogen exchanger), member 1	4	4 64.6 cM	20544
Gene Ontology	antiporter activity | basolateral plasma membrane | extracellular space | integral to membrane | ion channel activity | ion transport | membrane fraction | regulation of pH | sodium ion transport | sodium:hydrogen antiporter activity | solute:hydrogen antiporter activity | transport
Human Homolog	SLC9A1[solute carrier family 9 (sodium/hydrogen exchanger), isoform 1 (antiporter, Na+/H+, amiloride sensitive)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 42 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GTAGGTAATT (2) 3.3 0.0033 P8 Cb GC TACAAAGCCA 1.6 0.0016 P8 GC+1d culture TACAAAGCCA 6.8 0.0068 P8 GC+1d culture CAGCACGCTG (4) 1.1 0.0011 P8 GC+1d culture GTAGGTAATT (2) 1.1 0.0011 P8 GC+SHH+1d culture TACAAAGCCA 4.7 0.0047 P8 GC+SHH+1d culture GGCAGCTGGC (3) 1.2 0.0012 3T3 fibroblasts CAGCACGCTG (4) 3.5 0.0035 E15 cortex GCTGGGGCCA (7) 4.9 0.0049 P1 cortex CAGCACGCTG (4) 4.5 0.0045 Hypothalamus CAGCACGCTG (4) 3.6 0.0036 Hypothalamus GCTGGGGCCA (7) 1.8 0.0018 Hypothalamus GGCAGCTGGC (3) 1.8 0.0018 Hypothalamus GTAGGTAATT (2) 1.8 0.0018 E12.5 retina CAGCACGCTG (4) 1.9 0.0019 E14.5 retina CAGCACGCTG (4) 3.6 0.0036 E14.5 retina GTAGGTAATT (2) 3.6 0.0036 E14.5 retina TACAAAGCCA 1.8 0.0018 E16.5 retina TACAAAGCCA 5.4 0.0054 E16.5 retina CAGCACGCTG (4) 3.6 0.0036 E16.5 retina GTAGGTAATT (2) 1.8 0.0018 E18.5 retina TACAAAGCCA 3.6 0.0036 E18.5 retina GTAGGTAATT (2) 1.8 0.0018 P0.5 retina CAGCACGCTG (4) 3.9 0.0039 P2.5 retina GTAGGTAATT (2) 3.5 0.0035 P2.5 retina CAGCACGCTG (4) 1.8 0.0018 P2.5 retina TACAAAGCCA 1.8 0.0018 P4.5 retina CAGCACGCTG (4) 4 0.004 P4.5 retina TACAAAGCCA 2 0.002 P6.5 retina TACAAAGCCA 5 0.005 P6.5 retina CAGCACGCTG (4) 3.3 0.0033 P10.5 crx- retina CAGCACGCTG (4) 3.7 0.0037 P10.5 crx- retina TACAAAGCCA 3.7 0.0037 P10.5 crx- retina GTAGGTAATT (2) 1.9 0.0019 P10.5 crx+ retina GGCAGCTGGC (3) 3.8 0.0038 P10.5 crx+ retina TACAAAGCCA 3.8 0.0038 P10.5 crx+ retina CAGCACGCTG (4) 1.9 0.0019 P10.5 crx+ retina GCTGGGGCCA (7) 1.9 0.0019 P10.5 crx+ retina GTAGGTAATT (2) 1.9 0.0019 Adult retinal CAGCACGCTG (4) 3.7 0.0037 ONL GTAGGTAATT (2) 3.8 0.0038 ONL CAGCACGCTG (4) 1.9 0.0019