Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.43152	Rap2c	RAP2C, member of RAS oncogene family	X		72065
Gene Ontology	GTP binding | GTPase activity | membrane | signal transduction | small GTPase mediated signal transduction
Human Homolog	RAP2C[RAP2C, member of RAS oncogene family]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 56 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGAAAAAAAA (81) 27.7 0.0277 P8 Cb GC TGCAATTTGT (5) 3.3 0.0033 P8 Cb GC ATGACGAATC 1.6 0.0016 P8 Cb GC GCCATTAATT 1.6 0.0016 P8 Cb GC TAACCTATTA 1.6 0.0016 Cb medulloblastoma TGAAAAAAAA (81) 78.6 0.0786 Cb medulloblastoma ACTTTATATG (3) 2.3 0.0023 Cb medulloblastoma GGCCATTTAA 2.3 0.0023 P8 GC+1d culture TGAAAAAAAA (81) 26.3 0.0263 P8 GC+1d culture TAACCTATTA 3.4 0.0034 P8 GC+1d culture GGCCATTTAA 1.1 0.0011 P8 GC+1d culture TTCAAATGAC 1.1 0.0011 P8 GC+SHH+1d culture TGAAAAAAAA (81) 57.4 0.0574 P8 GC+SHH+1d culture TAACCTATTA 2.3 0.0023 P8 GC+SHH+1d culture TGCAATTTGT (5) 2.3 0.0023 P8 GC+SHH+1d culture TTCAAATGAC 1.2 0.0012 3T3 fibroblasts TGAAAAAAAA (81) 7 0.007 E15 cortex TGAAAAAAAA (81) 29.7 0.0297 E15 cortex AACTTTTTTT (8) 4.9 0.0049 P1 cortex ACTTTATATG (3) 9.1 0.0091 P1 cortex AACTTTTTTT (8) 4.5 0.0045 P1 cortex TAACCTATTA 4.5 0.0045 P1 cortex TGAAAAAAAA (81) 4.5 0.0045 Hypothalamus TGAAAAAAAA (81) 36.2 0.0362 Hypothalamus ACTTTATATG (3) 3.6 0.0036 Hypothalamus TTCAAATGAC 3.6 0.0036 Hypothalamus AACTTTTTTT (8) 1.8 0.0018 Hypothalamus GGCCATTTAA 1.8 0.0018 Hypothalamus TAACCTATTA 1.8 0.0018 E12.5 retina TGAAAAAAAA (81) 31.9 0.0319 E12.5 retina TAACCTATTA 3.8 0.0038 E12.5 retina ACATTATTTG (2) 1.9 0.0019 E12.5 retina ATGACGAATC 1.9 0.0019 E12.5 retina TTCAAATGAC 1.9 0.0019 E14.5 retina TGAAAAAAAA (81) 49.2 0.0492 E16.5 retina TGAAAAAAAA (81) 16.3 0.0163 E16.5 retina TGCAATTTGT (5) 1.8 0.0018 E18.5 retina TGAAAAAAAA (81) 74.6 0.0746 E18.5 retina ACATTATTTG (2) 1.8 0.0018 E18.5 retina TGCAATTTGT (5) 1.8 0.0018 E18.5 retina TTCAAATGAC 1.8 0.0018 P0.5 retina TGAAAAAAAA (81) 15.7 0.0157 P0.5 retina TAACCTATTA 2 0.002 P2.5 retina TGAAAAAAAA (81) 42.2 0.0422 P2.5 retina TAACCTATTA 1.8 0.0018 P2.5 retina TGCAATTTGT (5) 1.8 0.0018 P4.5 retina TGAAAAAAAA (81) 43.6 0.0436 P6.5 retina TGAAAAAAAA (81) 33.3 0.0333 P10.5 crx- retina TGAAAAAAAA (81) 9.3 0.0093 P10.5 crx+ retina TGAAAAAAAA (81) 19.2 0.0192 P10.5 crx+ retina ACATTATTTG (2) 1.9 0.0019 P10.5 crx+ retina GCCATTAATT 1.9 0.0019 Adult retinal TGAAAAAAAA (81) 13 0.013 ONL TGAAAAAAAA (81) 19.2 0.0192 ONL ATGACGAATC 1.9 0.0019 ONL TAACCTATTA 1.9 0.0019