Mouse Retina SAGE Library    [Home]    [Libraries]    [Images]

Gene:              Accession:    
e.g., Rho or Rhodopsin e.g., BG297543 batch search
Tag:        Cytoband (Mm):    
e.g., CCCAGTTCAC e.g., 6 E3
Unigene:        Cytoband (Hs):    
e.g., Mm.2965 batch search e.g., 3q21-q24


 UniGene  Symbol  Name  Chr  Cytoband  LocusLink 
 Mm.43331 Sfrs5splicing factor, arginine/serine-rich 5 (SRp40, HRS) 12    20384 
 Gene Ontology mRNA splice site selection | nuclear mRNA splicing, via spliceosome | nucleus | regulation of transcription, DNA-dependent | RNA binding | spliceosome complex
 Human Homolog SFRS5[splicing factor, arginine/serine-rich 5]
 Clusters 
   Neighbors    

No In Situ Hybridization images could be found.



SAGE Tags

Total 139 tags found with positive counts.

  all tags    reliable tags    sum by library with all tags    sum by library with reliable tags  
 Library  Tag (Other Genes)  Normalized Count  % in library 
P8 Cb GCTGGGTTGTTT (5)8.20.0082
P8 Cb GCAGACAAGCTG (2)6.50.0065
P8 Cb GCGTTTTTTAAA (10)6.50.0065
P8 Cb GCTGGAAAAAAA (27)3.30.0033
P8 Cb GCTTTTTAAAAT (7)3.30.0033
P8 Cb GCAAGGTTTCTC (2)1.60.0016
P8 Cb GCCCCAGGCTCA (3)1.60.0016
Cb medulloblastomaTGGAAAAAAA (27)25.40.0254
Cb medulloblastomaTTTGTACTTT (3)16.20.0162
Cb medulloblastomaGTTTTTTAAA (10)9.20.0092
Cb medulloblastomaCCCGGGCTCG (2)4.60.0046
Cb medulloblastomaTGGGTTGTTT (5)4.60.0046
Cb medulloblastomaAGACAAGCTG (2)2.30.0023
Cb medulloblastomaCCTTTGGTCT (2)2.30.0023
Cb medulloblastomaTTTTTTAAAA (15)2.30.0023
P8 GC+1d cultureAGACAAGCTG (2)12.60.0126
P8 GC+1d cultureGTTTTTTAAA (10)11.40.0114
P8 GC+1d cultureTTTGTACTTT (3)5.70.0057
P8 GC+1d cultureAAGGTTTCTC (2)4.60.0046
P8 GC+1d cultureCCCAGGCTCA (3)2.30.0023
P8 GC+1d cultureCCCGGGCTCG (2)2.30.0023
P8 GC+1d cultureTGGAAAAAAA (27)2.30.0023
P8 GC+1d cultureTGGGTTGTTT (5)1.10.0011
P8 GC+1d cultureTTTTTAAAAT (7)1.10.0011
P8 GC+SHH+1d cultureGTTTTTTAAA (10)14.10.0141
P8 GC+SHH+1d cultureTGGAAAAAAA (27)11.70.0117
P8 GC+SHH+1d cultureTTTGTACTTT (3)8.20.0082
P8 GC+SHH+1d cultureAGACAAGCTG (2)4.70.0047
P8 GC+SHH+1d cultureTTTTTAAAAT (7)3.50.0035
P8 GC+SHH+1d cultureTTTTTTAAAA (15)3.50.0035
P8 GC+SHH+1d cultureTGGGTTGTTT (5)2.30.0023
P8 GC+SHH+1d cultureCCCAGGCTCA (3)1.20.0012
P8 GC+SHH+1d cultureCCTTTGGTCT (2)1.20.0012
3T3 fibroblastsCCCAGGCTCA (3)31.50.0315
3T3 fibroblastsAGACAAGCTG (2)280.028
3T3 fibroblastsCCTTTGGTCT (2)3.50.0035
E15 cortexAGACAAGCTG (2)4.90.0049
E15 cortexCCCAGGCTCA (3)4.90.0049
E15 cortexGTTTTTTAAA (10)4.90.0049
E15 cortexTGGAAAAAAA (27)4.90.0049
P1 cortexAGACAAGCTG (2)18.20.0182
P1 cortexCCCAGGCTCA (3)4.50.0045
P1 cortexGTTTTTTAAA (10)4.50.0045
HypothalamusTGGGTTGTTT (5)19.90.0199
HypothalamusAGACAAGCTG (2)12.70.0127
HypothalamusTTTGTACTTT (3)5.40.0054
HypothalamusAAGGTTTCTC (2)3.60.0036
HypothalamusAGTGGCTGTC1.80.0018
HypothalamusCCCAGGCTCA (3)1.80.0018
HypothalamusGTTTTTTAAA (10)1.80.0018
HypothalamusTGGAAAAAAA (27)1.80.0018
E12.5 retinaAGACAAGCTG (2)16.90.0169
E12.5 retinaGTTTTTTAAA (10)11.30.0113
E12.5 retinaTGGGTTGTTT (5)11.30.0113
E12.5 retinaTGGAAAAAAA (27)5.60.0056
E12.5 retinaTTTTTAAAAT (7)3.80.0038
E12.5 retinaAAGGTTTCTC (2)1.90.0019
E12.5 retinaTTTGTACTTT (3)1.90.0019
E14.5 retinaTGGGTTGTTT (5)16.40.0164
E14.5 retinaTGGAAAAAAA (27)10.90.0109
E14.5 retinaGTTTTTTAAA (10)9.10.0091
E14.5 retinaAAGGTTTCTC (2)1.80.0018
E14.5 retinaAGACAAGCTG (2)1.80.0018
E14.5 retinaTTTGTACTTT (3)1.80.0018
E16.5 retinaTGGGTTGTTT (5)7.20.0072
E16.5 retinaGTTTTTTAAA (10)5.40.0054
E16.5 retinaTTTTTAAAAT (7)5.40.0054
E16.5 retinaTGGAAAAAAA (27)3.60.0036
E16.5 retinaCCCAGGCTCA (3)1.80.0018
E16.5 retinaCCCGGGCTCG (2)1.80.0018
E18.5 retinaTGGGTTGTTT (5)58.20.0582
E18.5 retinaTGGAAAAAAA (27)18.20.0182
E18.5 retinaAGACAAGCTG (2)9.10.0091
E18.5 retinaGTTTTTTAAA (10)9.10.0091
E18.5 retinaTTTTTTAAAA (15)5.50.0055
E18.5 retinaAAGGTTTCTC (2)1.80.0018
E18.5 retinaAGTGGCTGTC1.80.0018
E18.5 retinaCCCAGGCTCA (3)1.80.0018
E18.5 retinaTTTGTACTTT (3)1.80.0018
E18.5 retinaTTTTTAAAAT (7)1.80.0018
P0.5 retinaAGACAAGCTG (2)43.20.0432
P0.5 retinaTGGGTTGTTT (5)13.70.0137
P0.5 retinaTGGAAAAAAA (27)11.80.0118
P0.5 retinaGTTTTTTAAA (10)5.90.0059
P0.5 retinaCCCAGGCTCA (3)3.90.0039
P0.5 retinaTTTTTAAAAT (7)3.90.0039
P0.5 retinaAAGGTTTCTC (2)20.002
P2.5 retinaTGGGTTGTTT (5)21.10.0211
P2.5 retinaGTTTTTTAAA (10)15.80.0158
P2.5 retinaTGGAAAAAAA (27)10.60.0106
P2.5 retinaAAGGTTTCTC (2)8.80.0088
P2.5 retinaAGACAAGCTG (2)8.80.0088
P2.5 retinaCCCAGGCTCA (3)3.50.0035
P2.5 retinaATGCCCGGCT1.80.0018
P2.5 retinaTTTTTAAAAT (7)1.80.0018
P2.5 retinaTTTTTTAAAA (15)1.80.0018
P4.5 retinaGTTTTTTAAA (10)17.80.0178
P4.5 retinaAGACAAGCTG (2)7.90.0079
P4.5 retinaTTTTTAAAAT (7)7.90.0079
P4.5 retinaTGGGTTGTTT (5)5.90.0059
P4.5 retinaAAGGTTTCTC (2)40.004
P4.5 retinaCCCAGGCTCA (3)20.002
P4.5 retinaCCCGGGCTCG (2)20.002
P4.5 retinaTGGAAAAAAA (27)20.002
P6.5 retinaAGACAAGCTG (2)150.015
P6.5 retinaGTTTTTTAAA (10)6.70.0067
P6.5 retinaTGGGTTGTTT (5)6.70.0067
P6.5 retinaTGGAAAAAAA (27)50.005
P6.5 retinaTTTTTAAAAT (7)50.005
P6.5 retinaCCCAGGCTCA (3)3.30.0033
P6.5 retinaTTTGTACTTT (3)3.30.0033
P6.5 retinaAGTGGCTGTC1.70.0017
P6.5 retinaATGCCCGGCT1.70.0017
P10.5 crx- retinaAGACAAGCTG (2)9.30.0093
P10.5 crx- retinaTGGGTTGTTT (5)5.60.0056
P10.5 crx- retinaGTTTTTTAAA (10)3.70.0037
P10.5 crx- retinaTGGAAAAAAA (27)3.70.0037
P10.5 crx- retinaTTTGTACTTT (3)1.90.0019
P10.5 crx- retinaTTTTTAAAAT (7)1.90.0019
P10.5 crx+ retinaAGACAAGCTG (2)13.50.0135
P10.5 crx+ retinaGTTTTTTAAA (10)9.60.0096
P10.5 crx+ retinaTGGAAAAAAA (27)5.80.0058
P10.5 crx+ retinaTGGGTTGTTT (5)5.80.0058
P10.5 crx+ retinaTTTTTAAAAT (7)3.80.0038
P10.5 crx+ retinaATGCCCGGCT1.90.0019
P10.5 crx+ retinaCCCAGGCTCA (3)1.90.0019
Adult retinalAGACAAGCTG (2)25.90.0259
Adult retinalGTTTTTTAAA (10)3.70.0037
Adult retinalTGGAAAAAAA (27)3.70.0037
Adult retinalAAGGTTTCTC (2)1.90.0019
Adult retinalAGTGGCTGTC1.90.0019
Adult retinalCCCAGGCTCA (3)1.90.0019
Adult retinalTGGGTTGTTT (5)1.90.0019
ONLGTTTTTTAAA (10)9.60.0096
ONLTTTTTAAAAT (7)5.70.0057
ONLAAGGTTTCTC (2)1.90.0019
ONLAGACAAGCTG (2)1.90.0019
ONLCCCAGGCTCA (3)1.90.0019
ONLTGGGTTGTTT (5)1.90.0019