Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.43331	Sfrs5	splicing factor, arginine/serine-rich 5 (SRp40, HRS)	12		20384
Gene Ontology	mRNA splice site selection | nuclear mRNA splicing, via spliceosome | nucleus | regulation of transcription, DNA-dependent | RNA binding | spliceosome complex
Human Homolog	SFRS5[splicing factor, arginine/serine-rich 5]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 48 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AGACAAGCTG 6.5 0.0065 P8 Cb GC AAGGTTTCTC 1.6 0.0016 Cb medulloblastoma CCCGGGCTCG 4.6 0.0046 Cb medulloblastoma AGACAAGCTG 2.3 0.0023 Cb medulloblastoma CCTTTGGTCT (2) 2.3 0.0023 Cb medulloblastoma TTTTTTAAAA (3) 2.3 0.0023 P8 GC+1d culture AGACAAGCTG 12.6 0.0126 P8 GC+1d culture AAGGTTTCTC 4.6 0.0046 P8 GC+1d culture CCCGGGCTCG 2.3 0.0023 P8 GC+SHH+1d culture AGACAAGCTG 4.7 0.0047 P8 GC+SHH+1d culture TTTTTTAAAA (3) 3.5 0.0035 P8 GC+SHH+1d culture CCTTTGGTCT (2) 1.2 0.0012 3T3 fibroblasts AGACAAGCTG 28 0.028 3T3 fibroblasts CCTTTGGTCT (2) 3.5 0.0035 E15 cortex AGACAAGCTG 4.9 0.0049 P1 cortex AGACAAGCTG 18.2 0.0182 Hypothalamus AGACAAGCTG 12.7 0.0127 Hypothalamus AAGGTTTCTC 3.6 0.0036 Hypothalamus AGTGGCTGTC 1.8 0.0018 E12.5 retina AGACAAGCTG 16.9 0.0169 E12.5 retina AAGGTTTCTC 1.9 0.0019 E14.5 retina AAGGTTTCTC 1.8 0.0018 E14.5 retina AGACAAGCTG 1.8 0.0018 E16.5 retina CCCGGGCTCG 1.8 0.0018 E18.5 retina AGACAAGCTG 9.1 0.0091 E18.5 retina TTTTTTAAAA (3) 5.5 0.0055 E18.5 retina AAGGTTTCTC 1.8 0.0018 E18.5 retina AGTGGCTGTC 1.8 0.0018 P0.5 retina AGACAAGCTG 43.2 0.0432 P0.5 retina AAGGTTTCTC 2 0.002 P2.5 retina AAGGTTTCTC 8.8 0.0088 P2.5 retina AGACAAGCTG 8.8 0.0088 P2.5 retina ATGCCCGGCT 1.8 0.0018 P2.5 retina TTTTTTAAAA (3) 1.8 0.0018 P4.5 retina AGACAAGCTG 7.9 0.0079 P4.5 retina AAGGTTTCTC 4 0.004 P4.5 retina CCCGGGCTCG 2 0.002 P6.5 retina AGACAAGCTG 15 0.015 P6.5 retina AGTGGCTGTC 1.7 0.0017 P6.5 retina ATGCCCGGCT 1.7 0.0017 P10.5 crx- retina AGACAAGCTG 9.3 0.0093 P10.5 crx+ retina AGACAAGCTG 13.5 0.0135 P10.5 crx+ retina ATGCCCGGCT 1.9 0.0019 Adult retinal AGACAAGCTG 25.9 0.0259 Adult retinal AAGGTTTCTC 1.9 0.0019 Adult retinal AGTGGCTGTC 1.9 0.0019 ONL AAGGTTTCTC 1.9 0.0019 ONL AGACAAGCTG 1.9 0.0019