Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.43415	Cox6a1	cytochrome c oxidase, subunit VI a, polypeptide 1	5	5 60.0 cM	12861
Gene Ontology	cytochrome-c oxidase activity | electron transport | inner membrane | integral to membrane | mitochondrial membrane | mitochondrion | oxidoreductase activity | respiratory chain complex IV (sensu Eukarya)
Human Homolog	COX6A1[cytochrome c oxidase subunit VIa polypeptide 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 70 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CTCACTCCCA GCCTCCCCTT (2) TCGAGTGGCG TGAACCCACT TGTGGACCAC (2) 47.2 0.0472 Cb medulloblastoma CTCACTCCCA TCGAGTGGCG TGAACCCACT TGACACCACT 74 0.074 P8 GC+1d culture GCCTCCCCTT (2) GGCCGCCTCA (2) TGAACCCACT 61.6 0.0616 P8 GC+SHH+1d culture CTCACTCCCA GCCTCCCCTT (2) GGCCGCCTCA (2) TGAACCCACT TGTGGACCAC (2) 70.3 0.0703 3T3 fibroblasts CTCAACGTGT GCCTCCCCTT (2) TGAACCCAAT TGAACCCACT TGACACCACT 52.5 0.0525 E15 cortex AGGGTTGTGG GCCTCCCCTT (2) TGAACCCACT 34.6 0.0346 P1 cortex GCCTCCCCTT (2) TGAACCCAAT TGAACCCACT 36.3 0.0363 Hypothalamus CTCAACGTGT CTCACTCCCA GGCCGCCTCA (2) TCGAGTGGCG TGAACCCACT 47 0.047 E12.5 retina GCCTCCCCTT (2) TGAACCCACT 13.2 0.0132 E14.5 retina GGCCGCCTCA (2) TGAACCCACT 16.4 0.0164 E16.5 retina GCCTCCCCTT (2) GGCCGCCTCA (2) TGAACCCAAT TGAACCCACT 25.3 0.0253 E18.5 retina AGGGTTGTGG TGAACCCACT 23.7 0.0237 P0.5 retina AGGGTTGTGG GCCTCCCCTT (2) GGCCGCCTCA (2) TGAACCCACT 35.4 0.0354 P2.5 retina GGCCGCCTCA (2) TGAACCCACT TGCATAAGGA 15.9 0.0159 P4.5 retina GCCTCCCCTT (2) TGAACCCACT TGACACCACT 25.8 0.0258 P6.5 retina AGGGTTGTGG CTCAACGTGT GCCTCCCCTT (2) TGAACCCACT 41.7 0.0417 P10.5 crx- retina GCCTCCCCTT (2) TGAACCCACT TGACACCACT 35.4 0.0354 P10.5 crx+ retina CTCACTCCCA GCCTCCCCTT (2) TGAACCCACT TGCATAAGGA TGTGGACCAC (2) 61.4 0.0614 Adult retinal GGCCGCCTCA (2) TGAACCCACT 29.7 0.0297 ONL CTCACTCCCA TGAACCCACT TGCATAAGGA 34.4 0.0344