Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.4342	Tjp1	tight junction protein 1	7	7 28.5 cM	21872
Mm.4342	D130061D10Rik	RIKEN cDNA D130061D10 gene	7		319385
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 50 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TCTACACATA (5) 13.1 0.0131 P8 Cb GC GAAAAGAATG (2) 4.9 0.0049 P8 Cb GC GAAAAGACTG (10) 1.6 0.0016 Cb medulloblastoma TCTACACATA (5) 13.9 0.0139 P8 GC+1d culture TCTACACATA (5) 9.1 0.0091 P8 GC+1d culture TACATAATGC (2) 1.1 0.0011 P8 GC+SHH+1d culture TCTACACATA (5) 8.2 0.0082 P8 GC+SHH+1d culture TACATAATGC (2) 2.3 0.0023 P8 GC+SHH+1d culture CTGCAGCAGA (6) 1.2 0.0012 P8 GC+SHH+1d culture TAACCAGCAG (4) 1.2 0.0012 P1 cortex TCTACACATA (5) 13.6 0.0136 Hypothalamus TCTACACATA (5) 18.1 0.0181 Hypothalamus TACATAATGC (2) 1.8 0.0018 E12.5 retina TCTACACATA (5) 3.8 0.0038 E12.5 retina GAAAAGAATG (2) 1.9 0.0019 E14.5 retina GAAAAGAATG (2) 1.8 0.0018 E14.5 retina TCTACACATA (5) 1.8 0.0018 E16.5 retina GAAAAGAATG (2) 3.6 0.0036 E16.5 retina GAAAAGACTG (10) 3.6 0.0036 E16.5 retina TAACCAGCAG (4) 1.8 0.0018 E16.5 retina TCTACACATA (5) 1.8 0.0018 E18.5 retina GAAAAGAATG (2) 1.8 0.0018 E18.5 retina TCTACACATA (5) 1.8 0.0018 P0.5 retina GAAAAGAATG (2) 3.9 0.0039 P0.5 retina TAACCAGCAG (4) 3.9 0.0039 P0.5 retina TACATAATGC (2) 3.9 0.0039 P0.5 retina TCTACACATA (5) 3.9 0.0039 P2.5 retina TCTACACATA (5) 5.3 0.0053 P2.5 retina TACATAATGC (2) 1.8 0.0018 P4.5 retina TCTACACATA (5) 7.9 0.0079 P4.5 retina GAAAAGAATG (2) 2 0.002 P4.5 retina GAAAAGACTG (10) 2 0.002 P4.5 retina TACATAATGC (2) 2 0.002 P6.5 retina TCTACACATA (5) 6.7 0.0067 P6.5 retina CTGCAGCAGA (6) 1.7 0.0017 P6.5 retina TACATAATGC (2) 1.7 0.0017 P10.5 crx- retina TCTACACATA (5) 13 0.013 P10.5 crx- retina CTGCAGCAGA (6) 3.7 0.0037 P10.5 crx- retina TACATAATGC (2) 3.7 0.0037 P10.5 crx+ retina TACATAATGC (2) 3.8 0.0038 P10.5 crx+ retina GAAAAGAATG (2) 1.9 0.0019 P10.5 crx+ retina TCTACACATA (5) 1.9 0.0019 Adult retinal CTGCAGCAGA (6) 7.4 0.0074 Adult retinal TCTACACATA (5) 7.4 0.0074 Adult retinal TAACCAGCAG (4) 3.7 0.0037 Adult retinal GAAAAGACTG (10) 1.9 0.0019 Adult retinal TACATAATGC (2) 1.9 0.0019 ONL TCTACACATA (5) 3.8 0.0038 ONL CTGCAGCAGA (6) 1.9 0.0019 ONL TAACCAGCAG (4) 1.9 0.0019