Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.43745	Bat5	HLA-B associated transcript 5	17	17 19.01 cM	193742
Human Homolog	BAT5[HLA-B associated transcript 5]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 55 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TTGCTGTTTA 6.5 0.0065 P8 Cb GC TCCTCCCCCA (3) 1.6 0.0016 Cb medulloblastoma TTGCTGTTTA 16.2 0.0162 Cb medulloblastoma GAGCTCTGCC (3) 2.3 0.0023 Cb medulloblastoma TCCTCCCCCA (3) 2.3 0.0023 Cb medulloblastoma TCTCCTACCT 2.3 0.0023 Cb medulloblastoma TTTGCTGTTT (6) 2.3 0.0023 P8 GC+1d culture TTGCTGTTTA 14.8 0.0148 P8 GC+1d culture TCCTCCCCCA (3) 2.3 0.0023 P8 GC+1d culture AAGAGAGTCA (2) 1.1 0.0011 P8 GC+SHH+1d culture TTGCTGTTTA 7 0.007 P8 GC+SHH+1d culture GAGCTCTGCC (3) 4.7 0.0047 P8 GC+SHH+1d culture TCCTCCCCCA (3) 1.2 0.0012 3T3 fibroblasts TCCTCCACCA (8) 3.5 0.0035 E15 cortex GAGCTCTGCC (3) 4.9 0.0049 P1 cortex GAGCTCTGCC (3) 4.5 0.0045 P1 cortex GATGTGGTGG (6) 4.5 0.0045 P1 cortex TCCTCCCCCA (3) 4.5 0.0045 P1 cortex TTGCTGTTTA 4.5 0.0045 Hypothalamus AAGAGAGTCA (2) 1.8 0.0018 Hypothalamus TTGCTGTTTA 1.8 0.0018 E12.5 retina GAGCTCTGCC (3) 3.8 0.0038 E12.5 retina TTGCTGTTTA 1.9 0.0019 E14.5 retina GAGCTCTGCC (3) 3.6 0.0036 E14.5 retina TTGCTGTTTA 3.6 0.0036 E14.5 retina AAGAGAGTCA (2) 1.8 0.0018 E14.5 retina GATGTGGTGG (6) 1.8 0.0018 E16.5 retina CTCTGCCTGG 3.6 0.0036 E16.5 retina TCCTCCACCA (8) 3.6 0.0036 E16.5 retina TTGCTGTTTA 3.6 0.0036 E16.5 retina AAGAGAGTCA (2) 1.8 0.0018 E16.5 retina GAGCTCTGCC (3) 1.8 0.0018 E18.5 retina TCCTCCCCCA (3) 3.6 0.0036 E18.5 retina TTGCTGTTTA 3.6 0.0036 E18.5 retina TCTCCTACCT 1.8 0.0018 P0.5 retina GAGCTCTGCC (3) 5.9 0.0059 P2.5 retina GAGCTCTGCC (3) 1.8 0.0018 P2.5 retina TCCTCCCCCA (3) 1.8 0.0018 P2.5 retina TTGCTGTTTA 1.8 0.0018 P4.5 retina GATGTGGTGG (6) 2 0.002 P4.5 retina TCCTCCCCCA (3) 2 0.002 P4.5 retina TCTCCTACCT 2 0.002 P4.5 retina TTGCTGTTTA 2 0.002 P4.5 retina TTTGCTGTTT (6) 2 0.002 P6.5 retina TTGCTGTTTA 3.3 0.0033 P6.5 retina CTCTGCCTGG 1.7 0.0017 P6.5 retina GAGCTCTGCC (3) 1.7 0.0017 P10.5 crx- retina TTGCTGTTTA 13 0.013 P10.5 crx- retina AAGAGAGTCA (2) 1.9 0.0019 P10.5 crx- retina TCCTCCACCA (8) 1.9 0.0019 Adult retinal TTGCTGTTTA 7.4 0.0074 Adult retinal GAGCTCTGCC (3) 1.9 0.0019 Adult retinal TTTGCTGTTT (6) 1.9 0.0019 ONL TTGCTGTTTA 5.7 0.0057 ONL TCCTCCCCCA (3) 1.9 0.0019