Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.4375
Fto
fatso
8
8 41.9 cM
26383
Mm.4375
B130011D17Rik
RIKEN cDNA B130011D17 gene
8
399597
Mm.4375
4831440D22Rik
RIKEN cDNA 4831440D22 gene
8
320798
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 30 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GTCTGCTTGT
(
5
)
14.7
0.0147
Cb medulloblastoma
GTCTGCTTGT
(
5
)
9.2
0.0092
Cb medulloblastoma
GACTCCGTGA
(
3
)
2.3
0.0023
P8 GC+1d culture
GTCTGCTTGT
(
5
)
10.3
0.0103
P8 GC+1d culture
GACTCCGTGA
(
3
)
2.3
0.0023
P8 GC+SHH+1d culture
GTCTGCTTGT
(
5
)
12.9
0.0129
P8 GC+SHH+1d culture
GACTCCGTGA
(
3
)
2.3
0.0023
3T3 fibroblasts
TGAGACTGTG (
13
)
10.5
0.0105
3T3 fibroblasts
GTCTGCTTGT
(
5
)
3.5
0.0035
P1 cortex
GTCTGCTTGT
(
5
)
4.5
0.0045
Hypothalamus
GTCTGTTTGT
(
7
)
3.6
0.0036
Hypothalamus
GATCCCTCAG (
6
)
1.8
0.0018
Hypothalamus
GTCTGCTTGT
(
5
)
1.8
0.0018
E12.5 retina
GTCTGCTTGT
(
5
)
11.3
0.0113
E14.5 retina
GTCTGCTTGT
(
5
)
5.5
0.0055
E14.5 retina
GACTCCGTGA
(
3
)
1.8
0.0018
E16.5 retina
GATCCCTCAG (
6
)
3.6
0.0036
E16.5 retina
GTCTGCTTGT
(
5
)
1.8
0.0018
E16.5 retina
GTCTGTTTGT
(
7
)
1.8
0.0018
E18.5 retina
GTCTGCTTGT
(
5
)
18.2
0.0182
P0.5 retina
GTCTGCTTGT
(
5
)
11.8
0.0118
P2.5 retina
GTCTGCTTGT
(
5
)
10.6
0.0106
P4.5 retina
GTCTGCTTGT
(
5
)
9.9
0.0099
P6.5 retina
GTCTGCTTGT
(
5
)
16.7
0.0167
P10.5 crx- retina
GTCTGCTTGT
(
5
)
9.3
0.0093
P10.5 crx- retina
GACTCCGTGA
(
3
)
1.9
0.0019
P10.5 crx+ retina
GTCTGCTTGT
(
5
)
23.1
0.0231
Adult retinal
GTCTGCTTGT
(
5
)
9.3
0.0093
Adult retinal
GTCTGTTTGT
(
7
)
1.9
0.0019
ONL
GTCTGCTTGT
(
5
)
3.8
0.0038
