Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.43786	D13Ertd332e	DNA segment, Chr 13, ERATO Doi 332, expressed	13	13 46.0 cM	52612
Mm.43786	Cox7c	cytochrome c oxidase, subunit VIIc	13	11 44.11 cM	12867
Gene Ontology	cytochrome-c oxidase activity | electron transport | inner membrane | integral to membrane | mitochondrion | oxidoreductase activity | respiratory chain complex IV (sensu Eukarya)
Human Homolog	COX7C[cytochrome c oxidase subunit VIIc]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 103 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ACAAACTTAG (3) 48.9 0.0489 P8 Cb GC TTGGGCCAGA (3) 34.3 0.0343 P8 Cb GC TCGCTGCTGG (5) 6.5 0.0065 P8 Cb GC TTGTGCCAGA (4) 3.3 0.0033 P8 Cb GC ACCTCTGTGG (5) 1.6 0.0016 P8 Cb GC TCGGGCCAGA (3) 1.6 0.0016 P8 Cb GC TGATGAAGCA (3) 1.6 0.0016 P8 Cb GC TGGGCCAGAG (8) 1.6 0.0016 Cb medulloblastoma ACAAACTTAG (3) 60.1 0.0601 Cb medulloblastoma TTGGGCCAGA (3) 53.2 0.0532 Cb medulloblastoma GGGGCCAGGG (8) 4.6 0.0046 Cb medulloblastoma TGATGAAGCA (3) 4.6 0.0046 Cb medulloblastoma ACCTCTGTGG (5) 2.3 0.0023 Cb medulloblastoma TCGCTGCTGG (5) 2.3 0.0023 Cb medulloblastoma TCGGGCCAGA (3) 2.3 0.0023 Cb medulloblastoma TTGTGCCAGA (4) 2.3 0.0023 P8 GC+1d culture ACAAACTTAG (3) 34.2 0.0342 P8 GC+1d culture TTGGGCCAGA (3) 21.7 0.0217 P8 GC+1d culture TTGTGCCAGA (4) 2.3 0.0023 P8 GC+1d culture TCGGGCCAGA (3) 1.1 0.0011 P8 GC+SHH+1d culture TTGGGCCAGA (3) 39.8 0.0398 P8 GC+SHH+1d culture ACAAACTTAG (3) 30.4 0.0304 P8 GC+SHH+1d culture GGGGCCAGGG (8) 3.5 0.0035 P8 GC+SHH+1d culture TCGCTGCTGG (5) 3.5 0.0035 P8 GC+SHH+1d culture GAAAAAAACA (9) 1.2 0.0012 P8 GC+SHH+1d culture TTGTGCCAGA (4) 1.2 0.0012 3T3 fibroblasts TTGGGCCAGA (3) 157.7 0.1577 3T3 fibroblasts ACAAACTTAG (3) 24.5 0.0245 3T3 fibroblasts GTCATAGCTG (590) 10.5 0.0105 3T3 fibroblasts TGGGCCAGAG (8) 3.5 0.0035 E15 cortex TTGGGCCAGA (3) 74.2 0.0742 E15 cortex ACAAACTTAG (3) 29.7 0.0297 E15 cortex GTCATAGCTG (590) 4.9 0.0049 E15 cortex TCGGGCCAGA (3) 4.9 0.0049 P1 cortex TTGGGCCAGA (3) 95.5 0.0955 P1 cortex ACAAACTTAG (3) 31.8 0.0318 Hypothalamus ACAAACTTAG (3) 36.2 0.0362 Hypothalamus TTGGGCCAGA (3) 27.2 0.0272 Hypothalamus GGGGCCAGGG (8) 5.4 0.0054 Hypothalamus TCGCTGCTGG (5) 5.4 0.0054 Hypothalamus TCGTTGTGGG (14) 1.8 0.0018 Hypothalamus TTGTGCCAGA (4) 1.8 0.0018 E12.5 retina ACAAACTTAG (3) 31.9 0.0319 E12.5 retina TTGGGCCAGA (3) 22.5 0.0225 E12.5 retina ACCTCTGTGG (5) 1.9 0.0019 E12.5 retina TCGCTGCTGG (5) 1.9 0.0019 E14.5 retina ACAAACTTAG (3) 29.2 0.0292 E14.5 retina TCGCTGCTGG (5) 3.6 0.0036 E14.5 retina TTGTGCCAGA (4) 3.6 0.0036 E14.5 retina GAAAAAAACA (9) 1.8 0.0018 E16.5 retina ACAAACTTAG (3) 30.8 0.0308 E16.5 retina TTGGGCCAGA (3) 3.6 0.0036 E18.5 retina TTGGGCCAGA (3) 20 0.02 E18.5 retina ACAAACTTAG (3) 9.1 0.0091 E18.5 retina AAAACTGTGT (7) 1.8 0.0018 E18.5 retina GAAAAAAACA (9) 1.8 0.0018 E18.5 retina TCGTTGTGGG (14) 1.8 0.0018 P0.5 retina TTGGGCCAGA (3) 29.4 0.0294 P0.5 retina ACAAACTTAG (3) 19.6 0.0196 P0.5 retina GTCATAGCTG (590) 3.9 0.0039 P0.5 retina ACCTCTGTGG (5) 2 0.002 P0.5 retina TCGCTGCTGG (5) 2 0.002 P0.5 retina TGATGAAGCA (3) 2 0.002 P0.5 retina TTGGGCCAAA (5) 2 0.002 P2.5 retina TTGGGCCAGA (3) 28.2 0.0282 P2.5 retina ACAAACTTAG (3) 12.3 0.0123 P2.5 retina TCGTTGTGGG (14) 3.5 0.0035 P2.5 retina AAAACTGTGT (7) 1.8 0.0018 P2.5 retina ACCTCTGTGG (5) 1.8 0.0018 P2.5 retina GTCATAGCTG (590) 1.8 0.0018 P4.5 retina TTGGGCCAGA (3) 21.8 0.0218 P4.5 retina ACAAACTTAG (3) 19.8 0.0198 P4.5 retina TTGTGCCAGA (4) 4 0.004 P4.5 retina AAAACTGTGT (7) 2 0.002 P4.5 retina GTCATAGCTG (590) 2 0.002 P4.5 retina TTGGGCCAAA (5) 2 0.002 P6.5 retina TTGGGCCAGA (3) 41.7 0.0417 P6.5 retina ACAAACTTAG (3) 6.7 0.0067 P6.5 retina TCGCTGCTGG (5) 5 0.005 P6.5 retina GTCATAGCTG (590) 3.3 0.0033 P6.5 retina GGGGCCAGGG (8) 1.7 0.0017 P10.5 crx- retina ACAAACTTAG (3) 133.8 0.1338 P10.5 crx- retina TTGGGCCAGA (3) 31.6 0.0316 P10.5 crx- retina TCGCTGCTGG (5) 5.6 0.0056 P10.5 crx- retina TTGTGCCAGA (4) 3.7 0.0037 P10.5 crx- retina TTGGGCCAAA (5) 1.9 0.0019 P10.5 crx+ retina ACAAACTTAG (3) 76.9 0.0769 P10.5 crx+ retina TTGGGCCAGA (3) 46.1 0.0461 P10.5 crx+ retina TCGCTGCTGG (5) 7.7 0.0077 P10.5 crx+ retina TGATGAAGCA (3) 3.8 0.0038 P10.5 crx+ retina ACCTCTGTGG (5) 1.9 0.0019 P10.5 crx+ retina GGGGCCAGGG (8) 1.9 0.0019 P10.5 crx+ retina TTGGGCCAAA (5) 1.9 0.0019 Adult retinal ACAAACTTAG (3) 37 0.037 Adult retinal TTGGGCCAGA (3) 31.5 0.0315 Adult retinal GTCATAGCTG (590) 1.9 0.0019 Adult retinal TCGCTGCTGG (5) 1.9 0.0019 Adult retinal TTGGGCCAAA (5) 1.9 0.0019 Adult retinal TTGTGCCAGA (4) 1.9 0.0019 ONL TTGGGCCAGA (3) 21.1 0.0211 ONL ACAAACTTAG (3) 9.6 0.0096 ONL GTCATAGCTG (590) 5.7 0.0057 ONL TCGCTGCTGG (5) 1.9 0.0019