Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.43871	Trim35	tripartite motif-containing 35	14	14 D1	66854
Gene Ontology	cytoplasm | induction of apoptosis
Human Homolog	TRIM35[tripartite motif-containing 35]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 10 In Situ Hybridization Images

Images -- Click to Enlarge

SAGE Tags

Total 81 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TTTGCTGTGT (4) 22.8 0.0228 P8 Cb GC AAGGAAGAGA (6) 3.3 0.0033 P8 Cb GC TCAGTTGTGG (3) 1.6 0.0016 Cb medulloblastoma AAGGAAGAGA (6) 2.3 0.0023 P8 GC+1d culture AAGGAAGAGA (6) 27.4 0.0274 P8 GC+1d culture TTTGCTGTGT (4) 10.3 0.0103 P8 GC+1d culture AGTCCTGTGT (3) 8 0.008 P8 GC+1d culture TTCTTTCCAG (4) 2.3 0.0023 P8 GC+1d culture GCATCCAAGG (4) 1.1 0.0011 P8 GC+1d culture GCGGGGAAGG (3) 1.1 0.0011 P8 GC+1d culture TTTCTTTCAG 1.1 0.0011 P8 GC+SHH+1d culture AAGGAAGAGA (6) 11.7 0.0117 P8 GC+SHH+1d culture TTTGCTGTGT (4) 9.4 0.0094 P8 GC+SHH+1d culture AGTCCTGTGT (3) 2.3 0.0023 P8 GC+SHH+1d culture TGCACTTGTG 2.3 0.0023 P8 GC+SHH+1d culture TTCTTTCCAG (4) 2.3 0.0023 P8 GC+SHH+1d culture CTGGAGACCT (6) 1.2 0.0012 P8 GC+SHH+1d culture TCAGTTGTGG (3) 1.2 0.0012 3T3 fibroblasts AAGGAAGAGA (6) 28 0.028 3T3 fibroblasts TTTGCTGTGT (4) 3.5 0.0035 E15 cortex AAGGAAGAGA (6) 14.8 0.0148 E15 cortex GAAGCTCACA (2) 4.9 0.0049 E15 cortex GCGGGGAAGG (3) 4.9 0.0049 P1 cortex GCGGGGAAGG (3) 4.5 0.0045 P1 cortex TTCTTTCCAG (4) 4.5 0.0045 P1 cortex TTTGCTGTGT (4) 4.5 0.0045 Hypothalamus TTTGCTGTGT (4) 5.4 0.0054 Hypothalamus TTTCTTTCAG 3.6 0.0036 Hypothalamus AAGGAAGAGA (6) 1.8 0.0018 Hypothalamus AGGAAAGATG (5) 1.8 0.0018 E12.5 retina AAGGAAGAGA (6) 15 0.015 E12.5 retina GCATCCAAGG (4) 9.4 0.0094 E12.5 retina TCAGTTGTGG (3) 3.8 0.0038 E12.5 retina AGGAAAGATG (5) 1.9 0.0019 E12.5 retina CTGGAGACCT (6) 1.9 0.0019 E12.5 retina GAAGCTCACA (2) 1.9 0.0019 E12.5 retina TTTGCTGTGT (4) 1.9 0.0019 E14.5 retina AAGGAAGAGA (6) 10.9 0.0109 E14.5 retina TTTGCTGTGT (4) 3.6 0.0036 E14.5 retina AGGAAAGATG (5) 1.8 0.0018 E14.5 retina TCAGTTGTGG (3) 1.8 0.0018 E16.5 retina AAGGAAGAGA (6) 7.2 0.0072 E16.5 retina TTTGCTGTGT (4) 3.6 0.0036 E16.5 retina CTGGAGACCT (6) 1.8 0.0018 E16.5 retina GAAGCTCACA (2) 1.8 0.0018 E16.5 retina TCAGTTGTGG (3) 1.8 0.0018 E16.5 retina TTCTTTCCAG (4) 1.8 0.0018 E18.5 retina TTTGCTGTGT (4) 5.5 0.0055 E18.5 retina TTCTTTCCAG (4) 1.8 0.0018 P0.5 retina TTTGCTGTGT (4) 9.8 0.0098 P0.5 retina TCAGTTGTGG (3) 7.9 0.0079 P0.5 retina AAGGAAGAGA (6) 5.9 0.0059 P0.5 retina AGTCCTGTGT (3) 2 0.002 P0.5 retina GAAGCTCACA (2) 2 0.002 P2.5 retina TTTGCTGTGT (4) 10.6 0.0106 P2.5 retina AAGGAAGAGA (6) 7 0.007 P2.5 retina TCAGTTGTGG (3) 3.5 0.0035 P2.5 retina AGGAAAGATG (5) 1.8 0.0018 P2.5 retina GCGGGGAAGG (3) 1.8 0.0018 P4.5 retina TTTGCTGTGT (4) 9.9 0.0099 P4.5 retina AAGGAAGAGA (6) 7.9 0.0079 P4.5 retina AGTCCTGTGT (3) 2 0.002 P6.5 retina TTTGCTGTGT (4) 5 0.005 P6.5 retina AAGGAAGAGA (6) 1.7 0.0017 P6.5 retina AGTCCTGTGT (3) 1.7 0.0017 P10.5 crx- retina TTTGCTGTGT (4) 20.4 0.0204 P10.5 crx- retina AAGGAAGAGA (6) 3.7 0.0037 P10.5 crx- retina AGGAAAGATG (5) 1.9 0.0019 P10.5 crx- retina AGTCCTGTGT (3) 1.9 0.0019 P10.5 crx- retina TCAGTTGTGG (3) 1.9 0.0019 P10.5 crx- retina TTTCTTTCAG 1.9 0.0019 P10.5 crx+ retina TCAGTTGTGG (3) 7.7 0.0077 P10.5 crx+ retina TTTGCTGTGT (4) 5.8 0.0058 Adult retinal AAGGAAGAGA (6) 3.7 0.0037 Adult retinal GAAGCTCACA (2) 3.7 0.0037 Adult retinal TCAGTTGTGG (3) 3.7 0.0037 Adult retinal TTCTTTCCAG (4) 3.7 0.0037 Adult retinal TTTGCTGTGT (4) 3.7 0.0037 Adult retinal GCATCCAAGG (4) 1.9 0.0019 ONL GCATCCAAGG (4) 7.7 0.0077 ONL TGCACTTGTG 1.9 0.0019