Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.44207
Syap1
synapse associated protein 1
X
67043
Gene Ontology
nucleus
Human Homolog
SYAP1[synapse associated protein 1, SAP47 homolog (Drosophila)]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 18 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
Cb medulloblastoma
CTGAAACACT
(
3
)
2.3
0.0023
P8 GC+1d culture
TTTTCTAAAG (
10
)
1.1
0.0011
P8 GC+SHH+1d culture
CTGAAACACT
(
3
)
2.3
0.0023
P8 GC+SHH+1d culture
TTTTCTAAAG (
10
)
1.2
0.0012
3T3 fibroblasts
CTGAAACACT
(
3
)
3.5
0.0035
P1 cortex
CTGAAACACT
(
3
)
4.5
0.0045
Hypothalamus
CTGAAACACT
(
3
)
1.8
0.0018
E12.5 retina
TTTTCTAAAG (
10
)
3.8
0.0038
E12.5 retina
TCAAACTGGG
(
2
)
1.9
0.0019
E16.5 retina
TTTTCTAAAG (
10
)
1.8
0.0018
P0.5 retina
CTGAAACACT
(
3
)
3.9
0.0039
P0.5 retina
TCAAACTGGG
(
2
)
2
0.002
P0.5 retina
TTTTCTAAAG (
10
)
2
0.002
P6.5 retina
CTGAAACACT
(
3
)
3.3
0.0033
P6.5 retina
TCAAACTGGG
(
2
)
1.7
0.0017
P6.5 retina
TTTTCTAAAG (
10
)
1.7
0.0017
P10.5 crx+ retina
CTGAAACACT
(
3
)
1.9
0.0019
Adult retinal
CTGAAACACT
(
3
)
1.9
0.0019
