| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AGACTGATAT (2)
| 1.6 | 0.0016 |
| Cb medulloblastoma | TTTTTAAGTA (3)
| 4.6 | 0.0046 |
| P8 GC+1d culture | GGAAGTAGCT (3) TTTTTAAGTA (3)
| 4.5 | 0.0045 |
| P8 GC+SHH+1d culture | CAGCAGTCCT (2) GGAAGTAGCT (3)
| 2.4 | 0.0024 |
| E15 cortex | CAGCAGTCCT (2)
| 4.9 | 0.0049 |
| Hypothalamus | TTTTTAAGTA (3)
| 1.8 | 0.0018 |
| E12.5 retina | AGACTGATAT (2) GGAAGTAGCT (3)
| 3.8 | 0.0038 |
| E14.5 retina | CAGCAGTCCT (2) GGAAGTAGCT (3)
| 7.2 | 0.0072 |
| E16.5 retina | CAGCAGTCCT (2)
| 1.8 | 0.0018 |
| E18.5 retina | AGACTGATAT (2) CAGCAGTCCT (2) TTTTTAAGTA (3)
| 7.2 | 0.0072 |
| P0.5 retina | CAGCAGTCCT (2) GGAAGTAGCT (3) TTTTTAAGTA (3)
| 11.8 | 0.0118 |
| P2.5 retina | AGACTGATAT (2) GGAAGTAGCT (3)
| 7 | 0.007 |
| P4.5 retina | AGACTGATAT (2) CAGCAGTCCT (2) GGAAGTAGCT (3) TTTTTAAGTA (3)
| 12 | 0.012 |
| P6.5 retina | AGACTGATAT (2) CAGCAGTCCT (2) GGAAGTAGCT (3)
| 6.7 | 0.0067 |
| P10.5 crx- retina | AGACTGATAT (2) CAGCAGTCCT (2) GGAAGTAGCT (3) TTTTTAAGTA (3)
| 18.6 | 0.0186 |
| P10.5 crx+ retina | CAGCAGTCCT (2) GGAAGTAGCT (3)
| 5.7 | 0.0057 |
| Adult retinal | AGACTGATAT (2) GGAAGTAGCT (3)
| 11.2 | 0.0112 |
| ONL | AGACTGATAT (2) CAGCAGTCCT (2)
| 3.8 | 0.0038 |