Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.44854	A230057G18Rik	RIKEN cDNA A230057G18 gene	5		330166
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 22 In Situ Hybridization Images

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SAGE Tags

Total 86 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CTTGTAGCTG 37.5 0.0375 P8 Cb GC CACACACACA (106) 11.4 0.0114 P8 Cb GC TGGAAATCAA (3) 3.3 0.0033 Cb medulloblastoma CACACACACA (106) 32.4 0.0324 Cb medulloblastoma TGGAAATCAA (3) 2.3 0.0023 Cb medulloblastoma TTCTAGCAGA 2.3 0.0023 P8 GC+1d culture CTTGTAGCTG 18.3 0.0183 P8 GC+1d culture CACACACACA (106) 6.8 0.0068 P8 GC+1d culture TGGAAATCAA (3) 5.7 0.0057 P8 GC+1d culture GTTCTTTTAT 1.1 0.0011 P8 GC+SHH+1d culture CACACACACA (106) 9.4 0.0094 P8 GC+SHH+1d culture CTTGTAGCTG 4.7 0.0047 P8 GC+SHH+1d culture TGGAAATCAA (3) 2.3 0.0023 3T3 fibroblasts CACACACACA (106) 17.5 0.0175 E15 cortex CTTGTAGCTG 19.8 0.0198 E15 cortex CACACACACA (106) 4.9 0.0049 P1 cortex CTTGTAGCTG 68.2 0.0682 P1 cortex CACACACACA (106) 27.3 0.0273 Hypothalamus CACACACACA (106) 96 0.096 Hypothalamus CTTGTAGCTG 16.3 0.0163 Hypothalamus TGGAAATCAA (3) 3.6 0.0036 Hypothalamus GCCTCTCTGG (4) 1.8 0.0018 Hypothalamus TTCTAGCAGA 1.8 0.0018 E12.5 retina CTTGTAGCTG 60.1 0.0601 E12.5 retina CACACACACA (106) 3.8 0.0038 E12.5 retina GGTCCAGCCA (5) 3.8 0.0038 E14.5 retina CTTGTAGCTG 154.9 0.1549 E14.5 retina CACACACACA (106) 18.2 0.0182 E14.5 retina GAACAGACAA (6) 7.3 0.0073 E14.5 retina GGTCCAGCCA (5) 5.5 0.0055 E14.5 retina TTTCACAGAG (2) 3.6 0.0036 E14.5 retina GCCTCTCTGG (4) 1.8 0.0018 E14.5 retina TGGAAATCAA (3) 1.8 0.0018 E16.5 retina CTTGTAGCTG 119.5 0.1195 E16.5 retina CACACACACA (106) 12.7 0.0127 E16.5 retina GAACAGACAA (6) 9.1 0.0091 E16.5 retina GGTCCAGCCA (5) 3.6 0.0036 E16.5 retina GTTCTTTTAT 1.8 0.0018 E16.5 retina TGGAAATCAA (3) 1.8 0.0018 E18.5 retina CTTGTAGCTG 80 0.08 E18.5 retina CACACACACA (106) 5.5 0.0055 E18.5 retina GCAGGGACTT (3) 1.8 0.0018 E18.5 retina GTTCTTTTAT 1.8 0.0018 P0.5 retina CTTGTAGCTG 139.3 0.1393 P0.5 retina CACACACACA (106) 7.9 0.0079 P0.5 retina GAACAAAAGA (13) 3.9 0.0039 P0.5 retina GAACAGACAA (6) 3.9 0.0039 P0.5 retina GCAGGGACTT (3) 2 0.002 P0.5 retina GGTCCAGCCA (5) 2 0.002 P0.5 retina TGGAAATCAA (3) 2 0.002 P0.5 retina TTTCACAGAG (2) 2 0.002 P2.5 retina CTTGTAGCTG 209.4 0.2094 P2.5 retina CACACACACA (106) 21.1 0.0211 P2.5 retina GCCTCTCTGG (4) 5.3 0.0053 P2.5 retina GCAGGGACTT (3) 3.5 0.0035 P2.5 retina GGTCCAGCCA (5) 3.5 0.0035 P2.5 retina TGGAAATCAA (3) 3.5 0.0035 P2.5 retina GAACAGACAA (6) 1.8 0.0018 P2.5 retina GTTCTTTTAT 1.8 0.0018 P4.5 retina CTTGTAGCTG 136.7 0.1367 P4.5 retina CACACACACA (106) 7.9 0.0079 P4.5 retina GGTCCAGCCA (5) 4 0.004 P4.5 retina GCAGGGACTT (3) 2 0.002 P4.5 retina TGGAAATCAA (3) 2 0.002 P6.5 retina CTTGTAGCTG 60 0.06 P6.5 retina CACACACACA (106) 8.3 0.0083 P6.5 retina TGGAAATCAA (3) 6.7 0.0067 P6.5 retina GAACAAAAGA (13) 1.7 0.0017 P6.5 retina GAACAGACAA (6) 1.7 0.0017 P10.5 crx- retina CTTGTAGCTG 18.6 0.0186 P10.5 crx- retina TGGAAATCAA (3) 9.3 0.0093 P10.5 crx- retina CACACACACA (106) 5.6 0.0056 P10.5 crx- retina GCCTCTCTGG (4) 1.9 0.0019 P10.5 crx+ retina TGGAAATCAA (3) 19.2 0.0192 P10.5 crx+ retina CTTGTAGCTG 17.3 0.0173 P10.5 crx+ retina CACACACACA (106) 7.7 0.0077 P10.5 crx+ retina GAACAAAAGA (13) 1.9 0.0019 P10.5 crx+ retina GGTCCAGCCA (5) 1.9 0.0019 Adult retinal CACACACACA (106) 16.7 0.0167 Adult retinal CTTGTAGCTG 9.3 0.0093 Adult retinal GAACAGACAA (6) 1.9 0.0019 Adult retinal TGGAAATCAA (3) 1.9 0.0019 ONL CACACACACA (106) 21.1 0.0211 ONL TGGAAATCAA (3) 9.6 0.0096 ONL CTTGTAGCTG 3.8 0.0038 ONL GAACAAAAGA (13) 1.9 0.0019