Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.44876	Trim2	tripartite motif protein 2	3		80890
Gene Ontology	cytoplasm | intracellular | protein binding | protein ubiquitination | ubiquitin ligase complex | ubiquitin-protein ligase activity | zinc ion binding
Human Homolog	TRIM2[tripartite motif-containing 2]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 75 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CACAAAAGTC (3) 4.9 0.0049 P8 Cb GC ATGGTGATGT (5) 1.6 0.0016 Cb medulloblastoma CACAAAAGTC (3) 30.1 0.0301 Cb medulloblastoma ATGGTGATGT (5) 13.9 0.0139 Cb medulloblastoma ATTTGTAGCT (2) 2.3 0.0023 Cb medulloblastoma GAGACCAGGA (4) 2.3 0.0023 Cb medulloblastoma GATGTGCTGC (6) 2.3 0.0023 Cb medulloblastoma GATTTGCCAT (2) 2.3 0.0023 Cb medulloblastoma GTAACGATAT 2.3 0.0023 Cb medulloblastoma TTTGATGATG (7) 2.3 0.0023 P8 GC+1d culture CACAAAAGTC (3) 3.4 0.0034 P8 GC+1d culture TTTGATGATG (7) 1.1 0.0011 P8 GC+SHH+1d culture CACAAAAGTC (3) 3.5 0.0035 3T3 fibroblasts ATGGTGATGT (5) 3.5 0.0035 E15 cortex ATGGTGATGT (5) 9.9 0.0099 E15 cortex CACAAAAGTC (3) 4.9 0.0049 P1 cortex ATGGTGATGT (5) 4.5 0.0045 P1 cortex CCAGGAAATG (2) 4.5 0.0045 Hypothalamus CACAAAAGTC (3) 10.9 0.0109 Hypothalamus ATGGTGATGT (5) 3.6 0.0036 Hypothalamus ACGCTAATCT 1.8 0.0018 Hypothalamus GAGACCAGGA (4) 1.8 0.0018 Hypothalamus GTAACGATAT 1.8 0.0018 E12.5 retina ATGGTGATGT (5) 7.5 0.0075 E12.5 retina AAACTAAAGG (5) 1.9 0.0019 E12.5 retina CACAAAAGTC (3) 1.9 0.0019 E12.5 retina GCAGCCTCTT (11) 1.9 0.0019 E14.5 retina ATGGTGATGT (5) 7.3 0.0073 E14.5 retina CACAAAAGTC (3) 3.6 0.0036 E14.5 retina CCAGGAAATG (2) 1.8 0.0018 E14.5 retina GCAGCCTCTT (11) 1.8 0.0018 E14.5 retina GTAACGATAT 1.8 0.0018 E14.5 retina TTTTTGCTTA (2) 1.8 0.0018 E16.5 retina CACAAAAGTC (3) 10.9 0.0109 E16.5 retina ATGGTGATGT (5) 7.2 0.0072 E16.5 retina AAACTAAAGG (5) 1.8 0.0018 E16.5 retina ATTACGCCAA (233) 1.8 0.0018 E16.5 retina TTTGATGATG (7) 1.8 0.0018 E18.5 retina CACAAAAGTC (3) 7.3 0.0073 E18.5 retina ATGGTGATGT (5) 5.5 0.0055 E18.5 retina ATTTGTAGCT (2) 1.8 0.0018 E18.5 retina GAGACCAGGA (4) 1.8 0.0018 E18.5 retina TTTTTGCTTA (2) 1.8 0.0018 P0.5 retina ATTACGCCAA (233) 2 0.002 P0.5 retina GATGTGCTGC (6) 2 0.002 P0.5 retina TTTGATGATG (7) 2 0.002 P2.5 retina CACAAAAGTC (3) 12.3 0.0123 P2.5 retina ATGGTGATGT (5) 5.3 0.0053 P2.5 retina ATTTGTAGCT (2) 1.8 0.0018 P2.5 retina GATGTGCTGC (6) 1.8 0.0018 P4.5 retina CACAAAAGTC (3) 9.9 0.0099 P4.5 retina GCAGCCTCTT (11) 2 0.002 P6.5 retina CACAAAAGTC (3) 6.7 0.0067 P6.5 retina GCAGCCTCTT (11) 3.3 0.0033 P6.5 retina GTAACGATAT 3.3 0.0033 P6.5 retina CCAGGAAATG (2) 1.7 0.0017 P6.5 retina GAGACCAGGA (4) 1.7 0.0017 P6.5 retina TTTTTGCTTA (2) 1.7 0.0017 P10.5 crx- retina GAGACCAGGA (4) 5.6 0.0056 P10.5 crx- retina CACAAAAGTC (3) 3.7 0.0037 P10.5 crx- retina GCAGCCTCTT (11) 1.9 0.0019 P10.5 crx- retina GTAACGATAT 1.9 0.0019 P10.5 crx+ retina CACAAAAGTC (3) 9.6 0.0096 P10.5 crx+ retina ACGCTAATCT 3.8 0.0038 P10.5 crx+ retina ATTTGTAGCT (2) 1.9 0.0019 P10.5 crx+ retina GATTTGCCAT (2) 1.9 0.0019 P10.5 crx+ retina GTAACGATAT 1.9 0.0019 P10.5 crx+ retina TTTTTGCTTA (2) 1.9 0.0019 Adult retinal CACAAAAGTC (3) 5.6 0.0056 Adult retinal ATGGTGATGT (5) 3.7 0.0037 Adult retinal ATTACGCCAA (233) 3.7 0.0037 Adult retinal GATTTGCCAT (2) 3.7 0.0037 Adult retinal ATTTGTAGCT (2) 1.9 0.0019 Adult retinal GAGACCAGGA (4) 1.9 0.0019 ONL CACAAAAGTC (3) 3.8 0.0038