Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.4502	Mcm3	minichromosome maintenance deficient 3 (S. cerevisiae)	1		17215
Gene Ontology	ATP binding | cell cycle | DNA binding | DNA dependent ATPase activity | DNA replication | DNA replication initiation | nucleotide binding | nucleus | regulation of transcription, DNA-dependent
Human Homolog	MCM3[MCM3 minichromosome maintenance deficient 3 (S. cerevisiae)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 99 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GGAGCCCCTC (6) 9.8 0.0098 P8 Cb GC CTTTGTGCTT (2) 4.9 0.0049 P8 Cb GC TGGGAAAAAA (8) 4.9 0.0049 P8 Cb GC TGGAAAAAAA (27) 3.3 0.0033 Cb medulloblastoma TGGAAAAAAA (27) 25.4 0.0254 Cb medulloblastoma GGAGCCCCTC (6) 9.2 0.0092 Cb medulloblastoma TGGGAAAAAA (8) 4.6 0.0046 Cb medulloblastoma GGTGTTCTGA (3) 2.3 0.0023 P8 GC+1d culture TGGGAAAAAA (8) 6.8 0.0068 P8 GC+1d culture GGAGCCCCTC (6) 4.6 0.0046 P8 GC+1d culture GGTGTTCTGA (3) 2.3 0.0023 P8 GC+1d culture TGGAAAAAAA (27) 2.3 0.0023 P8 GC+1d culture CTTTGTGCTT (2) 1.1 0.0011 P8 GC+1d culture GTGTCTGATG (3) 1.1 0.0011 P8 GC+SHH+1d culture TGGAAAAAAA (27) 11.7 0.0117 P8 GC+SHH+1d culture CTTTGTGCTT (2) 4.7 0.0047 P8 GC+SHH+1d culture GGAGCCCCTC (6) 2.3 0.0023 P8 GC+SHH+1d culture GGCCGTGGGC (3) 2.3 0.0023 P8 GC+SHH+1d culture TGGGAAAAAA (8) 2.3 0.0023 P8 GC+SHH+1d culture CACCTTTCAC 1.2 0.0012 P8 GC+SHH+1d culture GGGACCCAGA (4) 1.2 0.0012 P8 GC+SHH+1d culture GTGTCTGAGG (4) 1.2 0.0012 3T3 fibroblasts CTTTGTGCTT (2) 3.5 0.0035 E15 cortex GGAGCCCCTC (6) 9.9 0.0099 E15 cortex GGTGTTCTGA (3) 4.9 0.0049 E15 cortex TGGAAAAAAA (27) 4.9 0.0049 E15 cortex TGGGAAAAAA (8) 4.9 0.0049 P1 cortex GGAGCCCCTC (6) 9.1 0.0091 P1 cortex GGGACCCAGA (4) 4.5 0.0045 P1 cortex TGGGAAAAAA (8) 4.5 0.0045 Hypothalamus GGCCGTGGGC (3) 7.2 0.0072 Hypothalamus GGTGTTCTGA (3) 7.2 0.0072 Hypothalamus GGGACCCAGA (4) 3.6 0.0036 Hypothalamus TGGAAAAAAA (27) 1.8 0.0018 Hypothalamus TGGGAAAAAA (8) 1.8 0.0018 E12.5 retina CTTTGTGCTT (2) 9.4 0.0094 E12.5 retina ATTTGAGCTG (2) 7.5 0.0075 E12.5 retina GGAGCCCCTC (6) 5.6 0.0056 E12.5 retina TGGAAAAAAA (27) 5.6 0.0056 E14.5 retina TGGAAAAAAA (27) 10.9 0.0109 E14.5 retina CTTTGTGCTT (2) 5.5 0.0055 E14.5 retina ATTTGAGCTG (2) 3.6 0.0036 E14.5 retina GGAGCCCCTC (6) 3.6 0.0036 E14.5 retina TGGGAAAAAA (8) 3.6 0.0036 E14.5 retina GTGTCTGATG (3) 1.8 0.0018 E14.5 retina TACAAAATAA (7) 1.8 0.0018 E14.5 retina TACAAAATAG (3) 1.8 0.0018 E16.5 retina GGCCGTGGGC (3) 5.4 0.0054 E16.5 retina CTTTGTGCTT (2) 3.6 0.0036 E16.5 retina GGAGCCCCTC (6) 3.6 0.0036 E16.5 retina GGGACCCAGA (4) 3.6 0.0036 E16.5 retina TGGAAAAAAA (27) 3.6 0.0036 E16.5 retina ATTTGAGCTG (2) 1.8 0.0018 E16.5 retina GTGTCTGATG (3) 1.8 0.0018 E16.5 retina TACAAAATAG (3) 1.8 0.0018 E16.5 retina TGGGAAAAAA (8) 1.8 0.0018 E18.5 retina TGGAAAAAAA (27) 18.2 0.0182 E18.5 retina CTTTGTGCTT (2) 12.7 0.0127 E18.5 retina GGAGCCCCTC (6) 5.5 0.0055 E18.5 retina TGGGAAAAAA (8) 3.6 0.0036 E18.5 retina GGGACCCAGA (4) 1.8 0.0018 P0.5 retina TGGAAAAAAA (27) 11.8 0.0118 P0.5 retina GGAGCCCCTC (6) 7.9 0.0079 P0.5 retina TGGGAAAAAA (8) 5.9 0.0059 P0.5 retina ATTTGAGCTG (2) 3.9 0.0039 P0.5 retina CTTTGTGCTT (2) 2 0.002 P0.5 retina GGGACCCAGA (4) 2 0.002 P0.5 retina TACAAAATAG (3) 2 0.002 P2.5 retina TGGAAAAAAA (27) 10.6 0.0106 P2.5 retina CTTTGTGCTT (2) 7 0.007 P2.5 retina GGAGCCCCTC (6) 7 0.007 P2.5 retina GGCCGTGGGC (3) 3.5 0.0035 P2.5 retina TACAAAATAA (7) 3.5 0.0035 P2.5 retina ATTTGAGCTG (2) 1.8 0.0018 P2.5 retina TGGGAAAAAA (8) 1.8 0.0018 P4.5 retina GGAGCCCCTC (6) 9.9 0.0099 P4.5 retina CTTTGTGCTT (2) 2 0.002 P4.5 retina TACAAAATAA (7) 2 0.002 P4.5 retina TGGAAAAAAA (27) 2 0.002 P4.5 retina TGGGAAAAAA (8) 2 0.002 P6.5 retina TGGAAAAAAA (27) 5 0.005 P6.5 retina CACCTTTCAC 3.3 0.0033 P6.5 retina GGAGCCCCTC (6) 3.3 0.0033 P6.5 retina TGGGAAAAAA (8) 1.7 0.0017 P10.5 crx- retina GGAGCCCCTC (6) 7.4 0.0074 P10.5 crx- retina GGCCGTGGGC (3) 3.7 0.0037 P10.5 crx- retina TGGAAAAAAA (27) 3.7 0.0037 P10.5 crx- retina TGGGAAAAAA (8) 1.9 0.0019 P10.5 crx+ retina GGAGCCCCTC (6) 11.5 0.0115 P10.5 crx+ retina TGGAAAAAAA (27) 5.8 0.0058 P10.5 crx+ retina GGGACCCAGA (4) 1.9 0.0019 P10.5 crx+ retina GGTGTTCTGA (3) 1.9 0.0019 P10.5 crx+ retina GTGTCTGATG (3) 1.9 0.0019 Adult retinal GGAGCCCCTC (6) 5.6 0.0056 Adult retinal TGGAAAAAAA (27) 3.7 0.0037 Adult retinal TGGGAAAAAA (8) 1.9 0.0019 ONL GGAGCCCCTC (6) 5.7 0.0057 ONL GGGACCCAGA (4) 1.9 0.0019 ONL TGGGAAAAAA (8) 1.9 0.0019