Mouse Retina SAGE Library    [Home]    [Libraries]    [Images]

Gene:              Accession:    
e.g., Rho or Rhodopsin e.g., BG297543 batch search
Tag:        Cytoband (Mm):    
e.g., CCCAGTTCAC e.g., 6 E3
Unigene:        Cytoband (Hs):    
e.g., Mm.2965 batch search e.g., 3q21-q24


 UniGene  Symbol  Name  Chr  Cytoband  LocusLink 
 Mm.45039 Lrrfip1leucine rich repeat (in FLII) interacting protein 1 1    16978 
 Human Homolog LRRFIP1[leucine rich repeat (in FLII) interacting protein 1]
 Clusters 
   Neighbors    

No In Situ Hybridization images could be found.



SAGE Tags

Total 114 tags found with positive counts.

  all tags    reliable tags    sum by library with all tags    sum by library with reliable tags  
 Library  Tag (Other Genes)  Normalized Count  % in library 
P8 Cb GCTGTGTGTGTG (115)27.70.0277
P8 Cb GCGGGACCCTGG (5)8.20.0082
P8 Cb GCTTTTTTTTTT (433)4.90.0049
P8 Cb GCCTTTAAAAAA (15)3.30.0033
P8 Cb GCCAGGGACTGA (2)1.60.0016
P8 Cb GCGATCTGCAAA (2)1.60.0016
P8 Cb GCTCAACAACAG (5)1.60.0016
Cb medulloblastomaTGTGTGTGTG (115)30.10.0301
Cb medulloblastomaCTTTAAAAAA (15)9.20.0092
Cb medulloblastomaTTTTTTTTTT (433)2.30.0023
P8 GC+1d cultureTGTGTGTGTG (115)27.40.0274
P8 GC+1d cultureTTTTTTTTTT (433)13.70.0137
P8 GC+1d cultureCAGGGACTGA (2)80.008
P8 GC+1d cultureCTTTAAAAAA (15)2.30.0023
P8 GC+1d cultureGGGACCCTGG (5)2.30.0023
P8 GC+SHH+1d cultureTGTGTGTGTG (115)28.10.0281
P8 GC+SHH+1d cultureGGGACCCTGG (5)70.007
P8 GC+SHH+1d cultureTTTTTTTTTT (433)5.90.0059
P8 GC+SHH+1d cultureCAGGGACTGA (2)1.20.0012
P8 GC+SHH+1d cultureCTTTAAAAAA (15)1.20.0012
P8 GC+SHH+1d cultureGGGCACGCAG (4)1.20.0012
P8 GC+SHH+1d cultureTGAACTCGTA1.20.0012
3T3 fibroblastsTGTGTGTGTG (115)280.028
3T3 fibroblastsGGGACCCTGG (5)140.014
3T3 fibroblastsCAAGGGTCAC3.50.0035
3T3 fibroblastsCAGGGACTGA (2)3.50.0035
3T3 fibroblastsTGAACTCGTA3.50.0035
E15 cortexGGGACCCTGG (5)9.90.0099
E15 cortexCAGGGACTGA (2)4.90.0049
E15 cortexTTTTTTTTTT (433)4.90.0049
P1 cortexTGTGTGTGTG (115)18.20.0182
P1 cortexCTTTAAAAAA (15)4.50.0045
P1 cortexTAACAACAGC (2)4.50.0045
P1 cortexTCCACAGCAT (4)4.50.0045
P1 cortexTGCCTTTACC (3)4.50.0045
P1 cortexTTTTTTTTTT (433)4.50.0045
HypothalamusTGTGTGTGTG (115)25.40.0254
HypothalamusTTTTTTTTTT (433)7.20.0072
HypothalamusCTTTAAAAAA (15)5.40.0054
HypothalamusTCCACAGCAT (4)3.60.0036
HypothalamusCAAGGGTCAC1.80.0018
HypothalamusCAGGGACTGA (2)1.80.0018
E12.5 retinaTGTGTGTGTG (115)43.20.0432
E12.5 retinaTTTTTTTTTT (433)7.50.0075
E12.5 retinaGGGACCCTGG (5)3.80.0038
E12.5 retinaCAGGGACTGA (2)1.90.0019
E12.5 retinaCTTTAAAAAA (15)1.90.0019
E12.5 retinaTGAACTCGTA1.90.0019
E14.5 retinaTGTGTGTGTG (115)54.70.0547
E14.5 retinaTTTTTTTTTT (433)23.70.0237
E14.5 retinaCAGGGACTGA (2)5.50.0055
E14.5 retinaGGGACCCTGG (5)3.60.0036
E14.5 retinaTGAACTCGTA3.60.0036
E14.5 retinaCAAGGGTCAC1.80.0018
E16.5 retinaTGTGTGTGTG (115)39.80.0398
E16.5 retinaCAGGGACTGA (2)9.10.0091
E16.5 retinaTTTTTTTTTT (433)5.40.0054
E16.5 retinaCTTTAAAAAA (15)3.60.0036
E16.5 retinaTGAACTCGTA3.60.0036
E16.5 retinaGGGACCCTGG (5)1.80.0018
E16.5 retinaTCAACAACAG (5)1.80.0018
E18.5 retinaTGTGTGTGTG (115)47.30.0473
E18.5 retinaCTTTAAAAAA (15)27.30.0273
E18.5 retinaTTTTTTTTTT (433)10.90.0109
E18.5 retinaGGGACCCTGG (5)1.80.0018
P0.5 retinaTGTGTGTGTG (115)21.60.0216
P0.5 retinaTTTTTTTTTT (433)9.80.0098
P0.5 retinaCAGGGACTGA (2)5.90.0059
P0.5 retinaGGGACCCTGG (5)3.90.0039
P0.5 retinaTGAACTCGTA3.90.0039
P0.5 retinaCTTTAAAAAA (15)20.002
P0.5 retinaGATCTGCAAA (2)20.002
P2.5 retinaTGTGTGTGTG (115)35.20.0352
P2.5 retinaTGAACTCGTA12.30.0123
P2.5 retinaCTTTAAAAAA (15)10.60.0106
P2.5 retinaTTTTTTTTTT (433)70.007
P2.5 retinaCAGGGACTGA (2)3.50.0035
P2.5 retinaCAAGGGTCAC1.80.0018
P2.5 retinaTCAACAACAG (5)1.80.0018
P2.5 retinaTGCCTTTACC (3)1.80.0018
P4.5 retinaTGTGTGTGTG (115)47.60.0476
P4.5 retinaCTTTAAAAAA (15)17.80.0178
P4.5 retinaTTTTTTTTTT (433)9.90.0099
P4.5 retinaTGAACTCGTA7.90.0079
P4.5 retinaTGCCTTTACC (3)40.004
P4.5 retinaCAGGGACTGA (2)20.002
P4.5 retinaGGGACCCTGG (5)20.002
P4.5 retinaGGGCACGCAG (4)20.002
P6.5 retinaTGTGTGTGTG (115)41.70.0417
P6.5 retinaCTTTAAAAAA (15)13.30.0133
P6.5 retinaTTTTTTTTTT (433)8.30.0083
P6.5 retinaCAGGGACTGA (2)3.30.0033
P6.5 retinaTCAACAACAG (5)3.30.0033
P10.5 crx- retinaTGTGTGTGTG (115)59.40.0594
P10.5 crx- retinaCAGGGACTGA (2)5.60.0056
P10.5 crx- retinaCTTTAAAAAA (15)1.90.0019
P10.5 crx- retinaGATCTGCAAA (2)1.90.0019
P10.5 crx+ retinaTGTGTGTGTG (115)44.20.0442
P10.5 crx+ retinaCAGGGACTGA (2)5.80.0058
P10.5 crx+ retinaCTTTAAAAAA (15)5.80.0058
P10.5 crx+ retinaTGCCTTTACC (3)3.80.0038
P10.5 crx+ retinaTTTTTTTTTT (433)3.80.0038
P10.5 crx+ retinaGGGCACGCAG (4)1.90.0019
P10.5 crx+ retinaTAACAACAGC (2)1.90.0019
Adult retinalTGTGTGTGTG (115)53.70.0537
Adult retinalCAGGGACTGA (2)7.40.0074
Adult retinalCTTTAAAAAA (15)7.40.0074
Adult retinalTTTTTTTTTT (433)7.40.0074
Adult retinalTGCCTTTACC (3)5.60.0056
Adult retinalTAACAACAGC (2)1.90.0019
ONLTGTGTGTGTG (115)230.023
ONLCAGGGACTGA (2)5.70.0057
ONLTTTTTTTTTT (433)3.80.0038
ONLCTTTAAAAAA (15)1.90.0019