Mouse Retina SAGE Library
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Gene: 
Accession: 
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag: 
Cytoband (Mm): 
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene: 
Cytoband (Hs): 
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.45039
Lrrfip1
leucine rich repeat (in FLII) interacting protein 1
1
16978
Human Homolog
LRRFIP1[leucine rich repeat (in FLII) interacting protein 1]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 114 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TGTGTGTGTG (
115
)
27.7
0.0277
P8 Cb GC
GGGACCCTGG (
5
)
8.2
0.0082
P8 Cb GC
TTTTTTTTTT (
433
)
4.9
0.0049
P8 Cb GC
CTTTAAAAAA (
15
)
3.3
0.0033
P8 Cb GC
CAGGGACTGA (
2
)
1.6
0.0016
P8 Cb GC
GATCTGCAAA
(
2
)
1.6
0.0016
P8 Cb GC
TCAACAACAG
(
5
)
1.6
0.0016
Cb medulloblastoma
TGTGTGTGTG (
115
)
30.1
0.0301
Cb medulloblastoma
CTTTAAAAAA (
15
)
9.2
0.0092
Cb medulloblastoma
TTTTTTTTTT (
433
)
2.3
0.0023
P8 GC+1d culture
TGTGTGTGTG (
115
)
27.4
0.0274
P8 GC+1d culture
TTTTTTTTTT (
433
)
13.7
0.0137
P8 GC+1d culture
CAGGGACTGA (
2
)
8
0.008
P8 GC+1d culture
CTTTAAAAAA (
15
)
2.3
0.0023
P8 GC+1d culture
GGGACCCTGG (
5
)
2.3
0.0023
P8 GC+SHH+1d culture
TGTGTGTGTG (
115
)
28.1
0.0281
P8 GC+SHH+1d culture
GGGACCCTGG (
5
)
7
0.007
P8 GC+SHH+1d culture
TTTTTTTTTT (
433
)
5.9
0.0059
P8 GC+SHH+1d culture
CAGGGACTGA (
2
)
1.2
0.0012
P8 GC+SHH+1d culture
CTTTAAAAAA (
15
)
1.2
0.0012
P8 GC+SHH+1d culture
GGGCACGCAG (
4
)
1.2
0.0012
P8 GC+SHH+1d culture
TGAACTCGTA
1.2
0.0012
3T3 fibroblasts
TGTGTGTGTG (
115
)
28
0.028
3T3 fibroblasts
GGGACCCTGG (
5
)
14
0.014
3T3 fibroblasts
CAAGGGTCAC
3.5
0.0035
3T3 fibroblasts
CAGGGACTGA (
2
)
3.5
0.0035
3T3 fibroblasts
TGAACTCGTA
3.5
0.0035
E15 cortex
GGGACCCTGG (
5
)
9.9
0.0099
E15 cortex
CAGGGACTGA (
2
)
4.9
0.0049
E15 cortex
TTTTTTTTTT (
433
)
4.9
0.0049
P1 cortex
TGTGTGTGTG (
115
)
18.2
0.0182
P1 cortex
CTTTAAAAAA (
15
)
4.5
0.0045
P1 cortex
TAACAACAGC
(
2
)
4.5
0.0045
P1 cortex
TCCACAGCAT
(
4
)
4.5
0.0045
P1 cortex
TGCCTTTACC
(
3
)
4.5
0.0045
P1 cortex
TTTTTTTTTT (
433
)
4.5
0.0045
Hypothalamus
TGTGTGTGTG (
115
)
25.4
0.0254
Hypothalamus
TTTTTTTTTT (
433
)
7.2
0.0072
Hypothalamus
CTTTAAAAAA (
15
)
5.4
0.0054
Hypothalamus
TCCACAGCAT
(
4
)
3.6
0.0036
Hypothalamus
CAAGGGTCAC
1.8
0.0018
Hypothalamus
CAGGGACTGA (
2
)
1.8
0.0018
E12.5 retina
TGTGTGTGTG (
115
)
43.2
0.0432
E12.5 retina
TTTTTTTTTT (
433
)
7.5
0.0075
E12.5 retina
GGGACCCTGG (
5
)
3.8
0.0038
E12.5 retina
CAGGGACTGA (
2
)
1.9
0.0019
E12.5 retina
CTTTAAAAAA (
15
)
1.9
0.0019
E12.5 retina
TGAACTCGTA
1.9
0.0019
E14.5 retina
TGTGTGTGTG (
115
)
54.7
0.0547
E14.5 retina
TTTTTTTTTT (
433
)
23.7
0.0237
E14.5 retina
CAGGGACTGA (
2
)
5.5
0.0055
E14.5 retina
GGGACCCTGG (
5
)
3.6
0.0036
E14.5 retina
TGAACTCGTA
3.6
0.0036
E14.5 retina
CAAGGGTCAC
1.8
0.0018
E16.5 retina
TGTGTGTGTG (
115
)
39.8
0.0398
E16.5 retina
CAGGGACTGA (
2
)
9.1
0.0091
E16.5 retina
TTTTTTTTTT (
433
)
5.4
0.0054
E16.5 retina
CTTTAAAAAA (
15
)
3.6
0.0036
E16.5 retina
TGAACTCGTA
3.6
0.0036
E16.5 retina
GGGACCCTGG (
5
)
1.8
0.0018
E16.5 retina
TCAACAACAG
(
5
)
1.8
0.0018
E18.5 retina
TGTGTGTGTG (
115
)
47.3
0.0473
E18.5 retina
CTTTAAAAAA (
15
)
27.3
0.0273
E18.5 retina
TTTTTTTTTT (
433
)
10.9
0.0109
E18.5 retina
GGGACCCTGG (
5
)
1.8
0.0018
P0.5 retina
TGTGTGTGTG (
115
)
21.6
0.0216
P0.5 retina
TTTTTTTTTT (
433
)
9.8
0.0098
P0.5 retina
CAGGGACTGA (
2
)
5.9
0.0059
P0.5 retina
GGGACCCTGG (
5
)
3.9
0.0039
P0.5 retina
TGAACTCGTA
3.9
0.0039
P0.5 retina
CTTTAAAAAA (
15
)
2
0.002
P0.5 retina
GATCTGCAAA
(
2
)
2
0.002
P2.5 retina
TGTGTGTGTG (
115
)
35.2
0.0352
P2.5 retina
TGAACTCGTA
12.3
0.0123
P2.5 retina
CTTTAAAAAA (
15
)
10.6
0.0106
P2.5 retina
TTTTTTTTTT (
433
)
7
0.007
P2.5 retina
CAGGGACTGA (
2
)
3.5
0.0035
P2.5 retina
CAAGGGTCAC
1.8
0.0018
P2.5 retina
TCAACAACAG
(
5
)
1.8
0.0018
P2.5 retina
TGCCTTTACC
(
3
)
1.8
0.0018
P4.5 retina
TGTGTGTGTG (
115
)
47.6
0.0476
P4.5 retina
CTTTAAAAAA (
15
)
17.8
0.0178
P4.5 retina
TTTTTTTTTT (
433
)
9.9
0.0099
P4.5 retina
TGAACTCGTA
7.9
0.0079
P4.5 retina
TGCCTTTACC
(
3
)
4
0.004
P4.5 retina
CAGGGACTGA (
2
)
2
0.002
P4.5 retina
GGGACCCTGG (
5
)
2
0.002
P4.5 retina
GGGCACGCAG (
4
)
2
0.002
P6.5 retina
TGTGTGTGTG (
115
)
41.7
0.0417
P6.5 retina
CTTTAAAAAA (
15
)
13.3
0.0133
P6.5 retina
TTTTTTTTTT (
433
)
8.3
0.0083
P6.5 retina
CAGGGACTGA (
2
)
3.3
0.0033
P6.5 retina
TCAACAACAG
(
5
)
3.3
0.0033
P10.5 crx- retina
TGTGTGTGTG (
115
)
59.4
0.0594
P10.5 crx- retina
CAGGGACTGA (
2
)
5.6
0.0056
P10.5 crx- retina
CTTTAAAAAA (
15
)
1.9
0.0019
P10.5 crx- retina
GATCTGCAAA
(
2
)
1.9
0.0019
P10.5 crx+ retina
TGTGTGTGTG (
115
)
44.2
0.0442
P10.5 crx+ retina
CAGGGACTGA (
2
)
5.8
0.0058
P10.5 crx+ retina
CTTTAAAAAA (
15
)
5.8
0.0058
P10.5 crx+ retina
TGCCTTTACC
(
3
)
3.8
0.0038
P10.5 crx+ retina
TTTTTTTTTT (
433
)
3.8
0.0038
P10.5 crx+ retina
GGGCACGCAG (
4
)
1.9
0.0019
P10.5 crx+ retina
TAACAACAGC
(
2
)
1.9
0.0019
Adult retinal
TGTGTGTGTG (
115
)
53.7
0.0537
Adult retinal
CAGGGACTGA (
2
)
7.4
0.0074
Adult retinal
CTTTAAAAAA (
15
)
7.4
0.0074
Adult retinal
TTTTTTTTTT (
433
)
7.4
0.0074
Adult retinal
TGCCTTTACC
(
3
)
5.6
0.0056
Adult retinal
TAACAACAGC
(
2
)
1.9
0.0019
ONL
TGTGTGTGTG (
115
)
23
0.023
ONL
CAGGGACTGA (
2
)
5.7
0.0057
ONL
TTTTTTTTTT (
433
)
3.8
0.0038
ONL
CTTTAAAAAA (
15
)
1.9
0.0019