Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.45151	Snrpd3	small nuclear ribonucleoprotein D3	10		67332
Gene Ontology	mRNA processing | nuclear mRNA splicing, via spliceosome | nucleus | pre-mRNA splicing factor activity | ribonucleoprotein complex | small nucleolar ribonucleoprotein complex | viral nucleocapsid
Human Homolog	SNRPD3[small nuclear ribonucleoprotein D3 polypeptide 18kDa]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 46 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGCATATGTC 14.7 0.0147 P8 Cb GC AAAAATAAAA (3) 8.2 0.0082 Cb medulloblastoma AAAAATAAAA (3) 20.8 0.0208 Cb medulloblastoma TGCATATGTC 4.6 0.0046 P8 GC+1d culture TGCATATGTC 13.7 0.0137 P8 GC+1d culture AAAAATAAAA (3) 11.4 0.0114 P8 GC+1d culture TAATACCCCC 1.1 0.0011 P8 GC+SHH+1d culture TGCATATGTC 18.7 0.0187 P8 GC+SHH+1d culture AAAAATAAAA (3) 5.9 0.0059 P8 GC+SHH+1d culture TAATACCCCC 1.2 0.0012 P1 cortex AAAAATAAAA (3) 4.5 0.0045 P1 cortex TGCATATGTC 4.5 0.0045 Hypothalamus AAAAATAAAA (3) 14.5 0.0145 Hypothalamus TGCATATGTC 10.9 0.0109 E12.5 retina TGCATATGTC 18.8 0.0188 E12.5 retina AAAAATAAAA (3) 1.9 0.0019 E14.5 retina TGCATATGTC 23.7 0.0237 E14.5 retina AAAAATAAAA (3) 16.4 0.0164 E14.5 retina TAATACCCCC 5.5 0.0055 E16.5 retina TGCATATGTC 27.2 0.0272 E16.5 retina AAAAATAAAA (3) 9.1 0.0091 E16.5 retina TTAAAGAGCA (2) 3.6 0.0036 E16.5 retina TAATACCCCC 1.8 0.0018 E18.5 retina TGCATATGTC 45.5 0.0455 E18.5 retina AAAAATAAAA (3) 7.3 0.0073 P0.5 retina TGCATATGTC 19.6 0.0196 P0.5 retina AAAAATAAAA (3) 3.9 0.0039 P0.5 retina TAATACCCCC 2 0.002 P0.5 retina TTAAAGAGCA (2) 2 0.002 P2.5 retina TGCATATGTC 17.6 0.0176 P2.5 retina TAATACCCCC 3.5 0.0035 P2.5 retina AAAAATAAAA (3) 1.8 0.0018 P2.5 retina TTAAAGAGCA (2) 1.8 0.0018 P4.5 retina TGCATATGTC 17.8 0.0178 P4.5 retina AAAAATAAAA (3) 5.9 0.0059 P6.5 retina AAAAATAAAA (3) 13.3 0.0133 P6.5 retina TGCATATGTC 10 0.01 P10.5 crx- retina AAAAATAAAA (3) 1.9 0.0019 P10.5 crx- retina TAATACCCCC 1.9 0.0019 P10.5 crx- retina TGCATATGTC 1.9 0.0019 P10.5 crx+ retina TGCATATGTC 9.6 0.0096 P10.5 crx+ retina AAAAATAAAA (3) 3.8 0.0038 Adult retinal TGCATATGTC 5.6 0.0056 Adult retinal AAAAATAAAA (3) 1.9 0.0019 Adult retinal TTAAAGAGCA (2) 1.9 0.0019 ONL TGCATATGTC 11.5 0.0115