Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.4533	Apoa4	apolipoprotein A-IV	9	9 27.0 cM	11808
Gene Ontology	extracellular | extracellular space | lipid binding | lipid transport | lipid transporter activity | lipoprotein metabolism | regulation of cholesterol absorption
Human Homolog	APOA4[apolipoprotein A-IV]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 49 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GGCAAGCCCC (6) 215.3 0.2153 P8 Cb GC TCCCTGTGGG (6) 3.3 0.0033 Cb medulloblastoma GGCAAGCCCC (6) 69.4 0.0694 Cb medulloblastoma TGGACAACCT (5) 2.3 0.0023 Cb medulloblastoma TGTGTGGGAG (4) 2.3 0.0023 P8 GC+1d culture GGCAAGCCCC (6) 137 0.137 P8 GC+1d culture AGCAGTCCCT 5.7 0.0057 P8 GC+1d culture TCCCTGTGGG (6) 2.3 0.0023 P8 GC+SHH+1d culture GGCAAGCCCC (6) 196.7 0.1967 P8 GC+SHH+1d culture AGCAGTCCCT 2.3 0.0023 P8 GC+SHH+1d culture TCCCTGTGGG (6) 1.2 0.0012 P8 GC+SHH+1d culture TCCTGTGGAA (2) 1.2 0.0012 3T3 fibroblasts GGCAAGCCCC (6) 389.1 0.3891 3T3 fibroblasts TCCCTGTGGG (6) 17.5 0.0175 E15 cortex GGCAAGCCCC (6) 183.1 0.1831 P1 cortex GGCAAGCCCC (6) 86.4 0.0864 P1 cortex AGCAGTCCCT 4.5 0.0045 Hypothalamus GGCAAGCCCC (6) 103.2 0.1032 E12.5 retina GGCAAGCCCC (6) 405.5 0.4055 E12.5 retina TCCCTGTGGG (6) 1.9 0.0019 E12.5 retina TCCTGTGGAA (2) 1.9 0.0019 E14.5 retina GGCAAGCCCC (6) 428.2 0.4282 E14.5 retina AGCAGTCCCT 1.8 0.0018 E16.5 retina GGCAAGCCCC (6) 594.1 0.5941 E16.5 retina TCCTGTGGAA (2) 1.8 0.0018 E18.5 retina GGCAAGCCCC (6) 372.9 0.3729 E18.5 retina TCCCTGTGGG (6) 3.6 0.0036 P0.5 retina GGCAAGCCCC (6) 237.5 0.2375 P0.5 retina TCCCTGTGGG (6) 3.9 0.0039 P0.5 retina AGCAGTCCCT 2 0.002 P2.5 retina GGCAAGCCCC (6) 256.9 0.2569 P2.5 retina TCCCTGTGGG (6) 1.8 0.0018 P4.5 retina GGCAAGCCCC (6) 328.9 0.3289 P4.5 retina TCCCTGTGGG (6) 2 0.002 P6.5 retina GGCAAGCCCC (6) 275.1 0.2751 P6.5 retina AGCAGTCCCT 1.7 0.0017 P6.5 retina TCCCTGTGGG (6) 1.7 0.0017 P6.5 retina TGTGTGGGAG (4) 1.7 0.0017 P10.5 crx- retina GGCAAGCCCC (6) 436.6 0.4366 P10.5 crx- retina TCCCTGTGGG (6) 3.7 0.0037 P10.5 crx- retina AGCAGTCCCT 1.9 0.0019 P10.5 crx+ retina GGCAAGCCCC (6) 344.1 0.3441 Adult retinal GGCAAGCCCC (6) 122.2 0.1222 Adult retinal AGCAGTCCCT 3.7 0.0037 Adult retinal TCCCTGTGGG (6) 3.7 0.0037 Adult retinal TGTGTGGGAG (4) 1.9 0.0019 ONL GGCAAGCCCC (6) 122.6 0.1226 ONL AGCAGTCCCT 1.9 0.0019 ONL TGGACAACCT (5) 1.9 0.0019