Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.4541	Sox2	SRY-box containing gene 2	3	3 A3 (3 15.0 cM)	20674
Gene Ontology	cell fate specification | cytoplasm | DNA binding | nucleus | nucleus | regulation of transcription, DNA-dependent | transcription factor activity
Human Homolog	SOX2[SRY (sex determining region Y)-box 2]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 17 In Situ Hybridization Images

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SAGE Tags

Total 33 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GATTCTCGGC TATATATTTG TGAATACACA (2) 6.5 0.0065 P8 GC+1d culture GATTCTCGGC TGAATACACA (2) 2.2 0.0022 P8 GC+SHH+1d culture TGAATACACA (2) 3.5 0.0035 3T3 fibroblasts CCTTTAGTCT (2) 3.5 0.0035 E15 cortex CCTTTAGTCT (2) GATTCTCGGC 9.8 0.0098 P1 cortex GATTCTCGGC 4.5 0.0045 Hypothalamus CCTTTAGTCT (2) TATATATTTG 5.4 0.0054 E12.5 retina GATTCTCGGC TATATATTTG TGAATACACA (2) 15 0.015 E14.5 retina CCTTTAGTCT (2) TATATATTTG TGAATACACA (2) 9 0.009 E16.5 retina GATTCTCGGC TATATATTTG 5.4 0.0054 E18.5 retina GATTCTCGGC TATATATTTG 9.1 0.0091 P0.5 retina CCTTTAGTCT (2) GATTCTCGGC TATATATTTG TGAGGGCTGG (2) 19.7 0.0197 P2.5 retina GATTCTCGGC TATATATTTG 7.1 0.0071 P4.5 retina TGAGGGCTGG (2) 2 0.002 P6.5 retina TGAATACACA (2) 1.7 0.0017 Adult retinal TGAATACACA (2) TGAGGGCTGG (2) 3.8 0.0038 ONL CCTTTAGTCT (2) 1.9 0.0019