Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.45436	Lyzs	lysozyme	10	10 66.0 cM	17105
Gene Ontology	carbohydrate metabolism | catalytic activity | cell wall catabolism | cytolysis | defense response to bacteria | extracellular | extracellular space | hydrolase activity | hydrolase activity, acting on glycosyl bonds | lysozyme activity | mitochondrion
Human Homolog	LYZ[lysozyme (renal amyloidosis)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 138 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAAAAAAAA (658) 203.9 0.2039 P8 Cb GC TGTAAGTCTG (3) 55.5 0.0555 P8 Cb GC CAAAAAAAAA (157) 47.3 0.0473 P8 Cb GC GAAAAAAAAA (204) 45.7 0.0457 P8 Cb GC TTTTTTTTTT (433) 4.9 0.0049 P8 Cb GC CACCTTCTGT 1.6 0.0016 P8 Cb GC GGACCCCTGA (3) 1.6 0.0016 P8 Cb GC GGTGGTGTGG 1.6 0.0016 Cb medulloblastoma AAAAAAAAAA (658) 797.8 0.7978 Cb medulloblastoma GAAAAAAAAA (204) 173.4 0.1734 Cb medulloblastoma CAAAAAAAAA (157) 92.5 0.0925 Cb medulloblastoma TGTAAGTCTG (3) 25.4 0.0254 Cb medulloblastoma CAAAAAAAAG (9) 2.3 0.0023 Cb medulloblastoma GGACCCCTGA (3) 2.3 0.0023 Cb medulloblastoma GGTGGTGTGG 2.3 0.0023 Cb medulloblastoma TGTCAAAAAA (6) 2.3 0.0023 Cb medulloblastoma TTTTTTTTTT (433) 2.3 0.0023 P8 GC+1d culture AAAAAAAAAA (658) 204.3 0.2043 P8 GC+1d culture TGTAAGTCTG (3) 57.1 0.0571 P8 GC+1d culture GAAAAAAAAA (204) 41.1 0.0411 P8 GC+1d culture CAAAAAAAAA (157) 37.7 0.0377 P8 GC+1d culture TTTTTTTTTT (433) 13.7 0.0137 P8 GC+1d culture CAAAAAAAAG (9) 2.3 0.0023 P8 GC+1d culture CACCTTCTGT 2.3 0.0023 P8 GC+1d culture TGTCAGTCTG (3) 2.3 0.0023 P8 GC+SHH+1d culture AAAAAAAAAA (658) 278.7 0.2787 P8 GC+SHH+1d culture GAAAAAAAAA (204) 77.3 0.0773 P8 GC+SHH+1d culture CAAAAAAAAA (157) 58.5 0.0585 P8 GC+SHH+1d culture TGTAAGTCTG (3) 43.3 0.0433 P8 GC+SHH+1d culture TTTTTTTTTT (433) 5.9 0.0059 P8 GC+SHH+1d culture TGTCAAAAAA (6) 2.3 0.0023 P8 GC+SHH+1d culture TGTCAGTCTG (3) 1.2 0.0012 3T3 fibroblasts AAAAAAAAAA (658) 28 0.028 3T3 fibroblasts TGTAAGTCTG (3) 3.5 0.0035 E15 cortex AAAAAAAAAA (658) 212.8 0.2128 E15 cortex GAAAAAAAAA (204) 54.4 0.0544 E15 cortex TGTAAGTCTG (3) 44.5 0.0445 E15 cortex CAAAAAAAAA (157) 34.6 0.0346 E15 cortex TTTTTTTTTT (433) 4.9 0.0049 P1 cortex AAAAAAAAAA (658) 245.4 0.2454 P1 cortex GAAAAAAAAA (204) 45.5 0.0455 P1 cortex CAAAAAAAAA (157) 22.7 0.0227 P1 cortex TGTAAGTCTG (3) 9.1 0.0091 P1 cortex TTTTTTTTTT (433) 4.5 0.0045 Hypothalamus AAAAAAAAAA (658) 123.2 0.1232 Hypothalamus GAAAAAAAAA (204) 67 0.067 Hypothalamus CAAAAAAAAA (157) 39.8 0.0398 Hypothalamus GGGGGTTGGG (5) 7.2 0.0072 Hypothalamus TTTTTTTTTT (433) 7.2 0.0072 Hypothalamus TGTAAGTCTG (3) 5.4 0.0054 Hypothalamus GGACCCCTGA (3) 3.6 0.0036 Hypothalamus AGGCATTCAG (3) 1.8 0.0018 Hypothalamus TGTCAAAAAA (6) 1.8 0.0018 Hypothalamus TGTCAGTCTG (3) 1.8 0.0018 E12.5 retina AAAAAAAAAA (658) 138.9 0.1389 E12.5 retina GAAAAAAAAA (204) 46.9 0.0469 E12.5 retina TGTAAGTCTG (3) 26.3 0.0263 E12.5 retina CAAAAAAAAA (157) 22.5 0.0225 E12.5 retina TTTTTTTTTT (433) 7.5 0.0075 E14.5 retina AAAAAAAAAA (658) 94.7 0.0947 E14.5 retina GAAAAAAAAA (204) 34.6 0.0346 E14.5 retina TGTAAGTCTG (3) 23.7 0.0237 E14.5 retina TTTTTTTTTT (433) 23.7 0.0237 E14.5 retina CAAAAAAAAA (157) 9.1 0.0091 E14.5 retina AGGCATTCAG (3) 1.8 0.0018 E16.5 retina AAAAAAAAAA (658) 43.5 0.0435 E16.5 retina GAAAAAAAAA (204) 23.5 0.0235 E16.5 retina TGTAAGTCTG (3) 19.9 0.0199 E16.5 retina CAAAAAAAAA (157) 9.1 0.0091 E16.5 retina TTTTTTTTTT (433) 5.4 0.0054 E16.5 retina ACACAACCAC (5) 1.8 0.0018 E16.5 retina GGTGGTGTGG 1.8 0.0018 E18.5 retina AAAAAAAAAA (658) 374.7 0.3747 E18.5 retina GAAAAAAAAA (204) 65.5 0.0655 E18.5 retina CAAAAAAAAA (157) 41.8 0.0418 E18.5 retina TGTAAGTCTG (3) 25.5 0.0255 E18.5 retina TTTTTTTTTT (433) 10.9 0.0109 E18.5 retina TGTCAAAAAA (6) 3.6 0.0036 E18.5 retina ACACAACCAC (5) 1.8 0.0018 E18.5 retina CAAAAAAAAG (9) 1.8 0.0018 E18.5 retina CACCTTCTGT 1.8 0.0018 P0.5 retina CAAAAAAAAA (157) 137.4 0.1374 P0.5 retina AAAAAAAAAA (658) 117.8 0.1178 P0.5 retina GAAAAAAAAA (204) 35.3 0.0353 P0.5 retina TGTAAGTCTG (3) 15.7 0.0157 P0.5 retina TTTTTTTTTT (433) 9.8 0.0098 P0.5 retina CAAAAAAAAG (9) 3.9 0.0039 P0.5 retina ACACAACCAC (5) 2 0.002 P0.5 retina GGACCCCTGA (3) 2 0.002 P2.5 retina AAAAAAAAAA (658) 329.1 0.3291 P2.5 retina GAAAAAAAAA (204) 86.2 0.0862 P2.5 retina CAAAAAAAAA (157) 52.8 0.0528 P2.5 retina TGTAAGTCTG (3) 29.9 0.0299 P2.5 retina TTTTTTTTTT (433) 7 0.007 P4.5 retina AAAAAAAAAA (658) 283.3 0.2833 P4.5 retina GAAAAAAAAA (204) 51.5 0.0515 P4.5 retina CAAAAAAAAA (157) 41.6 0.0416 P4.5 retina TGTAAGTCTG (3) 27.7 0.0277 P4.5 retina TTTTTTTTTT (433) 9.9 0.0099 P4.5 retina TGTCAAAAAA (6) 4 0.004 P6.5 retina AAAAAAAAAA (658) 266.8 0.2668 P6.5 retina GAAAAAAAAA (204) 40 0.04 P6.5 retina CAAAAAAAAA (157) 31.7 0.0317 P6.5 retina TGTAAGTCTG (3) 15 0.015 P6.5 retina TTTTTTTTTT (433) 8.3 0.0083 P6.5 retina ACACAACCAC (5) 3.3 0.0033 P6.5 retina TGTCAGTCTG (3) 3.3 0.0033 P6.5 retina AGGCATTCAG (3) 1.7 0.0017 P6.5 retina CACCTTCTGT 1.7 0.0017 P6.5 retina GGTGGTGTGG 1.7 0.0017 P10.5 crx- retina AAAAAAAAAA (658) 44.6 0.0446 P10.5 crx- retina TGTAAGTCTG (3) 31.6 0.0316 P10.5 crx- retina GAAAAAAAAA (204) 16.7 0.0167 P10.5 crx- retina CAAAAAAAAA (157) 13 0.013 P10.5 crx- retina AGGCATTCAG (3) 1.9 0.0019 P10.5 crx- retina TGTCAGTCTG (3) 1.9 0.0019 P10.5 crx+ retina AAAAAAAAAA (658) 96.1 0.0961 P10.5 crx+ retina GAAAAAAAAA (204) 42.3 0.0423 P10.5 crx+ retina CAAAAAAAAA (157) 32.7 0.0327 P10.5 crx+ retina TGTAAGTCTG (3) 15.4 0.0154 P10.5 crx+ retina TTTTTTTTTT (433) 3.8 0.0038 P10.5 crx+ retina ACACAACCAC (5) 1.9 0.0019 P10.5 crx+ retina CAAAAAAAAG (9) 1.9 0.0019 P10.5 crx+ retina CACCTTCTGT 1.9 0.0019 P10.5 crx+ retina TGTCAAAAAA (6) 1.9 0.0019 Adult retinal AAAAAAAAAA (658) 57.4 0.0574 Adult retinal CAAAAAAAAA (157) 20.4 0.0204 Adult retinal GAAAAAAAAA (204) 16.7 0.0167 Adult retinal TGTAAGTCTG (3) 11.1 0.0111 Adult retinal TTTTTTTTTT (433) 7.4 0.0074 Adult retinal CAAAAAAAAG (9) 1.9 0.0019 ONL AAAAAAAAAA (658) 103.4 0.1034 ONL GAAAAAAAAA (204) 24.9 0.0249 ONL CAAAAAAAAA (157) 17.2 0.0172 ONL GGGGGTTGGG (5) 15.3 0.0153 ONL TGTAAGTCTG (3) 7.7 0.0077 ONL TTTTTTTTTT (433) 3.8 0.0038 ONL TGTCAAAAAA (6) 1.9 0.0019