Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.45609	Ppm1d	protein phosphatase 1D magnesium-dependent, delta isoform	11	11 47.0 cM	53892
Gene Ontology	catalytic activity | G2/M transition of mitotic cell cycle | hydrolase activity | magnesium ion binding | magnesium-dependent protein serine/threonine phosphatase activity | manganese ion binding | phosphoprotein phosphatase activity | protein amino acid dephosphorylation | protein serine/threonine phosphatase activity | protein serine/threonine phosphatase complex | response to pathogenic bacteria
Human Homolog	PPM1D[protein phosphatase 1D magnesium-dependent, delta isoform]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 48 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGGAAGAAAC (7) 8.2 0.0082 P8 Cb GC GACCAAAAAA (7) 3.3 0.0033 Cb medulloblastoma TGGAAGAAAC (7) 37 0.037 Cb medulloblastoma GACCAAAAAA (7) 6.9 0.0069 P8 GC+1d culture TGGAAGAAAC (7) 6.8 0.0068 P8 GC+1d culture ACTTTTTAAA (5) 1.1 0.0011 P8 GC+1d culture GACCAAAAAA (7) 1.1 0.0011 P8 GC+SHH+1d culture TGGAAGAAAC (7) 9.4 0.0094 P8 GC+SHH+1d culture GACCAAAAAA (7) 4.7 0.0047 P8 GC+SHH+1d culture ACTTTTTAAA (5) 2.3 0.0023 P8 GC+SHH+1d culture TACAGGCAAT (2) 1.2 0.0012 3T3 fibroblasts TGGAAGAAAC (7) 7 0.007 3T3 fibroblasts TACAGGCAAT (2) 3.5 0.0035 Hypothalamus TGGAAGAAAC (7) 19.9 0.0199 Hypothalamus GACCAAAAAA (7) 3.6 0.0036 Hypothalamus TCTTTAATAC (2) 3.6 0.0036 Hypothalamus ACTTTTTAAA (5) 1.8 0.0018 Hypothalamus TACAGGCAAT (2) 1.8 0.0018 E12.5 retina TGGAAGAAAC (7) 18.8 0.0188 E12.5 retina TACAGGCAAT (2) 3.8 0.0038 E14.5 retina TGGAAGAAAC (7) 5.5 0.0055 E14.5 retina GACCAAAAAA (7) 1.8 0.0018 E16.5 retina TGGAAGAAAC (7) 16.3 0.0163 E16.5 retina GACCAAAAAA (7) 1.8 0.0018 E18.5 retina GACCAAAAAA (7) 7.3 0.0073 E18.5 retina TGGAAGAAAC (7) 7.3 0.0073 P0.5 retina TGGAAGAAAC (7) 2 0.002 P2.5 retina TGGAAGAAAC (7) 10.6 0.0106 P2.5 retina GACCAAAAAA (7) 1.8 0.0018 P4.5 retina TGGAAGAAAC (7) 7.9 0.0079 P4.5 retina GACCAAAAAA (7) 4 0.004 P4.5 retina ACTTTTTAAA (5) 2 0.002 P6.5 retina GACCAAAAAA (7) 10 0.01 P6.5 retina TGGAAGAAAC (7) 8.3 0.0083 P6.5 retina ACTTTTTAAA (5) 1.7 0.0017 P6.5 retina TACAGGCAAT (2) 1.7 0.0017 P10.5 crx- retina TGGAAGAAAC (7) 31.6 0.0316 P10.5 crx- retina TACAGGCAAT (2) 5.6 0.0056 P10.5 crx- retina ACTTTTTAAA (5) 3.7 0.0037 P10.5 crx+ retina TGGAAGAAAC (7) 9.6 0.0096 P10.5 crx+ retina GACCAAAAAA (7) 7.7 0.0077 Adult retinal GACCAAAAAA (7) 7.4 0.0074 Adult retinal TGGAAGAAAC (7) 5.6 0.0056 Adult retinal TACAGGCAAT (2) 1.9 0.0019 ONL TGGAAGAAAC (7) 7.7 0.0077 ONL GACCAAAAAA (7) 5.7 0.0057 ONL ACTTTTTAAA (5) 3.8 0.0038 ONL TCTTTAATAC (2) 1.9 0.0019