Mouse Retina SAGE Library    [Home]    [Libraries]    [Images]
Gene:              Accession:    
e.g., Rho or Rhodopsin e.g., BG297543 batch search
Tag:        Cytoband (Mm):    
e.g., CCCAGTTCAC e.g., 6 E3
Unigene:        Cytoband (Hs):    
e.g., Mm.2965 batch search e.g., 3q21-q24

 UniGene  Symbol  Name  Chr  Cytoband  LocusLink 
 Mm.45645 2010015M23RikRIKEN cDNA 2010015M23 gene 11    72087 
 Mm.45645 5730507C05RikRIKEN cDNA 5730507C05 gene 11    70633 
 Mm.45645 Sfrs1splicing factor, arginine/serine-rich 1 (ASF/SF2) 11  11 49.0 cM  110809 
 Gene Ontology mRNA processing | mRNA splice site selection | mRNA splice site selection | nuclear mRNA splicing, via spliceosome | nucleic acid binding | nucleus | pre-mRNA splicing factor activity | protein targeting | RNA binding | RNA binding | spliceosome complex
 Human Homolog SFRS1[splicing factor, arginine/serine-rich 1 (splicing factor 2, alternate splicing factor)]
 Clusters 
   Neighbors    

No In Situ Hybridization images could be found.



SAGE Tags

Total 61 tags found with positive counts.

  all tags    reliable tags    sum by library with all tags    sum by library with reliable tags  
 Library  Tag (Other Genes)  Normalized Count  % in library 
P8 Cb GCAATCCTGGTA (3)
AGTCAATTAT (3)
CAAATTTCTT (3)
CGTGAGGCAG (3)
CTTTTGTAGG (3)
GAGCGGGATC (3)
GATCCCAAAT (4)
GTTGTCCTTT (3)
45.50.0455
Cb medulloblastomaGAGCGGGATC (3)
GATCCCAAAT (4)
11.50.0115
P8 GC+1d cultureAATCCTGGTA (3)
CCCAGCTTAC (3)
GAGCGGGATC (3)
GATCCCAAAT (4)
GTTGTCCTTT (3)
18.20.0182
P8 GC+SHH+1d cultureGAGCGGGATC (3)
GATCCCAAAT (4)
GTTGTCCTTT (3)
18.70.0187
E15 cortexGAGCGGGATC (3)
69.30.0693
P1 cortexCAAATTTCTT (3)
GAGCGGGATC (3)
22.70.0227
HypothalamusCGTGAGGCAG (3)
GAGCGGGATC (3)
GTTGTCCTTT (3)
14.50.0145
E12.5 retinaCTTTTGTAGG (3)
GAGCGGGATC (3)
GATCCCAAAT (4)
18.80.0188
E14.5 retinaGAGCGGGATC (3)
GATCCCAAAT (4)
9.10.0091
E16.5 retinaAGTCAATTAT (3)
CTTTTGTAGG (3)
GAGCGGGATC (3)
GATCCCAAAT (4)
12.60.0126
E18.5 retinaGAGCGGGATC (3)
GATCCCAAAT (4)
12.80.0128
P0.5 retinaAATCCTGGTA (3)
CAAATTTCTT (3)
CCCAGCTTAC (3)
GAGCGGGATC (3)
GATCCCAAAT (4)
GTTGTCCTTT (3)
37.40.0374
P2.5 retinaCAAATTTCTT (3)
GAGCGGGATC (3)
GATCCCAAAT (4)
31.70.0317
P4.5 retinaGAGCGGGATC (3)
GATCCCAAAT (4)
GTTGTCCTTT (3)
17.90.0179
P6.5 retinaGAGCGGGATC (3)
GATCCCAAAT (4)
200.02
P10.5 crx- retinaAGTCAATTAT (3)
GAGCGGGATC (3)
GATCCCAAAT (4)
29.70.0297
P10.5 crx+ retinaCGTGAGGCAG (3)
GAGCGGGATC (3)
GATCCCAAAT (4)
34.60.0346
Adult retinalCGTGAGGCAG (3)
GAGCGGGATC (3)
GATCCCAAAT (4)
22.30.0223
ONLCAAATTTCTT (3)
GAGCGGGATC (3)
GATCCCAAAT (4)
11.40.0114