Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.46044	Akap9	A kinase (PRKA) anchor protein (yotiao) 9	5		100986
Gene Ontology	cytoplasm | kinase activity | pericentriolar material | protein binding
Human Homolog	AKAP9[A kinase (PRKA) anchor protein (yotiao) 9]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 85 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAGAGAAAAC (2) AGGAGATAAT ATATTGAAGA ATGCCCAGTT GAGATAAATG TTTCTGCTTA (2) 22.8 0.0228 Cb medulloblastoma AAGCCGAGAT GTGTTTCCTT (2) TTTCTGCTTA (2) 9.2 0.0092 P8 GC+1d culture AGGAGATAAT ATATTGAAGA ATTTCTATGT GTGTTTCCTT (2) TCACAGAGTT TTTCTGCTTA (2) 27.3 0.0273 P8 GC+SHH+1d culture AGAAATCAGG (2) AGGAGATAAT ATATTGAAGA ATTTCTATGT GAAAAGTTGC TATATTTGTG TTTCTGCTTA (2) 21 0.021 3T3 fibroblasts GTGTTTCCTT (2) TTTCTGCTTA (2) 7 0.007 E15 cortex AAGCCGAGAT 9.9 0.0099 P1 cortex AAGCCGAGAT AGGAGATAAT ATATTGAAGA TTTCTGCTTA (2) 27.2 0.0272 Hypothalamus AGAAATCAGG (2) ATATTGAAGA GAAAAGTTGC 25.3 0.0253 E12.5 retina AAGCCGAGAT ATATTGAAGA ATTTCTATGT TATATTTGTG TCACAGAGTT TTTCTGCTTA (2) 30.2 0.0302 E14.5 retina AGAAATCAGG (2) ATATTGAAGA GAAAAGGAGA GAAAAGTTGC GTGTTTCCTT (2) TTTCTGCTTA (2) TTTTTGCTTA (2) 16.3 0.0163 E16.5 retina ATATTGAAGA GAAAAGTTGC TATATTTGTG TCACAGAGTT TTTCTGCTTA (2) 21.7 0.0217 E18.5 retina AGGAGATAAT ATATTGAAGA GTGTTTCCTT (2) TTTCTGCTTA (2) TTTTTGCTTA (2) 12.7 0.0127 P0.5 retina ATGCCCAGTT GAGATAAATG TCACAGAGTT 6 0.006 P2.5 retina AGAAATCAGG (2) ATATTGAAGA GAAAAGTTGC TTTCTGCTTA (2) 14.1 0.0141 P4.5 retina ATATTGAAGA GAGATAAATG TTTCTGCTTA (2) 21.8 0.0218 P6.5 retina ATATTGAAGA CTGCCCTGCA (2) GAAAAGTTGC TATATTTGTG TTTCTGCTTA (2) TTTTTGCTTA (2) 21.8 0.0218 P10.5 crx- retina ATATTGAAGA GAAAAGTTGC TTTCTGCTTA (2) 13.1 0.0131 P10.5 crx+ retina ATATTGAAGA TTTTTGCTTA (2) 15.4 0.0154 Adult retinal AAGAGAAAAC (2) ATATTGAAGA CTGCCCTGCA (2) 14.9 0.0149 ONL AAGAGAAAAC (2) AGAAATCAGG (2) ATATTGAAGA ATGCCCAGTT GAAAAGTTGC GTGTTTCCTT (2) 22.9 0.0229