Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.46063	Cdc40	cell division cycle 40 homolog (yeast)	10		71713
Gene Ontology	mRNA processing | nuclear mRNA splicing, via spliceosome | nucleus | spliceosome complex
Human Homolog	CDC40[cell division cycle 40 homolog (yeast)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 56 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCTTTAATCC (355) 52.2 0.0522 P8 Cb GC TTAACAAATC (3) 3.3 0.0033 P8 Cb GC AGTTCCAGGA (11) 1.6 0.0016 Cb medulloblastoma CCTTTAATCC (355) 41.6 0.0416 Cb medulloblastoma AGAGAAATCT (3) 2.3 0.0023 Cb medulloblastoma GACTGTAAAA (2) 2.3 0.0023 P8 GC+1d culture CCTTTAATCC (355) 32 0.032 P8 GC+1d culture AGTTCCAGGA (11) 2.3 0.0023 P8 GC+1d culture TTAACAAATC (3) 1.1 0.0011 P8 GC+SHH+1d culture CCTTTAATCC (355) 25.8 0.0258 P8 GC+SHH+1d culture TTAACAAATC (3) 3.5 0.0035 P8 GC+SHH+1d culture AGTTCCAGGA (11) 2.3 0.0023 P8 GC+SHH+1d culture GACTGTAAAA (2) 1.2 0.0012 P8 GC+SHH+1d culture GCAGCAGTTC (2) 1.2 0.0012 3T3 fibroblasts CCTTTAATCC (355) 70.1 0.0701 E15 cortex CCTTTAATCC (355) 54.4 0.0544 P1 cortex CCTTTAATCC (355) 154.5 0.1545 P1 cortex AGAGAAATCT (3) 9.1 0.0091 Hypothalamus CCTTTAATCC (355) 19.9 0.0199 Hypothalamus GACTGTAAAA (2) 1.8 0.0018 E12.5 retina CCTTTAATCC (355) 75.1 0.0751 E12.5 retina AGTTCCAGGA (11) 1.9 0.0019 E14.5 retina CCTTTAATCC (355) 120.3 0.1203 E14.5 retina AGTTCCAGGA (11) 1.8 0.0018 E16.5 retina CCTTTAATCC (355) 68.8 0.0688 E16.5 retina GACTGTAAAA (2) 1.8 0.0018 E18.5 retina CCTTTAATCC (355) 23.6 0.0236 E18.5 retina AGTTCCAGGA (11) 3.6 0.0036 E18.5 retina GCAGCAGTTC (2) 3.6 0.0036 E18.5 retina GACTGTAAAA (2) 1.8 0.0018 E18.5 retina TTAACAAATC (3) 1.8 0.0018 P0.5 retina CCTTTAATCC (355) 72.6 0.0726 P0.5 retina GACTGTAAAA (2) 3.9 0.0039 P0.5 retina AGTTCCAGGA (11) 2 0.002 P2.5 retina CCTTTAATCC (355) 70.4 0.0704 P2.5 retina AGTTCCAGGA (11) 1.8 0.0018 P2.5 retina GACTGTAAAA (2) 1.8 0.0018 P2.5 retina TTAACAAATC (3) 1.8 0.0018 P4.5 retina CCTTTAATCC (355) 43.6 0.0436 P4.5 retina AGTTCCAGGA (11) 7.9 0.0079 P6.5 retina CCTTTAATCC (355) 70 0.07 P6.5 retina AGTTCCAGGA (11) 3.3 0.0033 P6.5 retina GACTGTAAAA (2) 1.7 0.0017 P6.5 retina GCAGCAGTTC (2) 1.7 0.0017 P6.5 retina TTAACAAATC (3) 1.7 0.0017 P10.5 crx- retina CCTTTAATCC (355) 63.2 0.0632 P10.5 crx- retina AGTTCCAGGA (11) 1.9 0.0019 P10.5 crx+ retina CCTTTAATCC (355) 38.4 0.0384 P10.5 crx+ retina AGTTCCAGGA (11) 1.9 0.0019 P10.5 crx+ retina GCAGCAGTTC (2) 1.9 0.0019 Adult retinal CCTTTAATCC (355) 129.6 0.1296 Adult retinal AGTTCCAGGA (11) 1.9 0.0019 Adult retinal GACTGTAAAA (2) 1.9 0.0019 ONL CCTTTAATCC (355) 84.3 0.0843 ONL AGTTCCAGGA (11) 9.6 0.0096 ONL TTAACAAATC (3) 1.9 0.0019