Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.46346
Nhlrc2
NHL repeat containing 2
19
66866
Mm.46346
AI835049
expressed sequence AI835049
19
107240
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 56 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
AAAAAAAAAA (
658
)
203.9
0.2039
P8 Cb GC
AAACAGATTA
(
2
)
3.3
0.0033
P8 Cb GC
GCTGGTGCAG
(
3
)
3.3
0.0033
P8 Cb GC
CCTGTGATGT (
4
)
1.6
0.0016
Cb medulloblastoma
AAAAAAAAAA (
658
)
797.8
0.7978
Cb medulloblastoma
AAACAGATTA
(
2
)
4.6
0.0046
Cb medulloblastoma
TGTTTTACTA
(
4
)
2.3
0.0023
P8 GC+1d culture
AAAAAAAAAA (
658
)
204.3
0.2043
P8 GC+1d culture
AAACAGATTA
(
2
)
2.3
0.0023
P8 GC+1d culture
CCTGTGATGT (
4
)
1.1
0.0011
P8 GC+SHH+1d culture
AAAAAAAAAA (
658
)
278.7
0.2787
P8 GC+SHH+1d culture
AAACAGATTA
(
2
)
5.9
0.0059
P8 GC+SHH+1d culture
TATGATGAAG
(
2
)
1.2
0.0012
3T3 fibroblasts
AAAAAAAAAA (
658
)
28
0.028
E15 cortex
AAAAAAAAAA (
658
)
212.8
0.2128
E15 cortex
AAACAGATTA
(
2
)
9.9
0.0099
P1 cortex
AAAAAAAAAA (
658
)
245.4
0.2454
P1 cortex
TGTTTTACTA
(
4
)
4.5
0.0045
Hypothalamus
AAAAAAAAAA (
658
)
123.2
0.1232
Hypothalamus
AAACAGATTA
(
2
)
1.8
0.0018
Hypothalamus
GCTGGTGCAG
(
3
)
1.8
0.0018
E12.5 retina
AAAAAAAAAA (
658
)
138.9
0.1389
E12.5 retina
GCTGGTGCAG
(
3
)
1.9
0.0019
E14.5 retina
AAAAAAAAAA (
658
)
94.7
0.0947
E14.5 retina
AAACAGATTA
(
2
)
1.8
0.0018
E14.5 retina
CCTGTGATGT (
4
)
1.8
0.0018
E16.5 retina
AAAAAAAAAA (
658
)
43.5
0.0435
E16.5 retina
GCTGGTGCAG
(
3
)
14.5
0.0145
E16.5 retina
AAACAGATTA
(
2
)
3.6
0.0036
E18.5 retina
AAAAAAAAAA (
658
)
374.7
0.3747
E18.5 retina
AAACAGATTA
(
2
)
1.8
0.0018
E18.5 retina
GCTGGTGCAG
(
3
)
1.8
0.0018
P0.5 retina
AAAAAAAAAA (
658
)
117.8
0.1178
P0.5 retina
AAACAGATTA
(
2
)
2
0.002
P0.5 retina
TATGATGAAG
(
2
)
2
0.002
P0.5 retina
TGTTTTACTA
(
4
)
2
0.002
P2.5 retina
AAAAAAAAAA (
658
)
329.1
0.3291
P2.5 retina
AAACAGATTA
(
2
)
3.5
0.0035
P2.5 retina
TATGATGAAG
(
2
)
1.8
0.0018
P4.5 retina
AAAAAAAAAA (
658
)
283.3
0.2833
P4.5 retina
AAACAGATTA
(
2
)
2
0.002
P4.5 retina
TATGATGAAG
(
2
)
2
0.002
P6.5 retina
AAAAAAAAAA (
658
)
266.8
0.2668
P6.5 retina
AAACAGATTA
(
2
)
5
0.005
P6.5 retina
GCTGGTGCAG
(
3
)
3.3
0.0033
P10.5 crx- retina
AAAAAAAAAA (
658
)
44.6
0.0446
P10.5 crx- retina
AAACAGATTA
(
2
)
9.3
0.0093
P10.5 crx- retina
GCTGGTGCAG
(
3
)
1.9
0.0019
P10.5 crx+ retina
AAAAAAAAAA (
658
)
96.1
0.0961
P10.5 crx+ retina
AAACAGATTA
(
2
)
3.8
0.0038
Adult retinal
AAAAAAAAAA (
658
)
57.4
0.0574
Adult retinal
AAACAGATTA
(
2
)
1.9
0.0019
Adult retinal
CCTGTGATGT (
4
)
1.9
0.0019
ONL
AAAAAAAAAA (
658
)
103.4
0.1034
ONL
AAACAGATTA
(
2
)
5.7
0.0057
ONL
CCTGTGATGT (
4
)
1.9
0.0019
