Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.4636	Neurod1	neurogenic differentiation 1	2	2 C3 (2 46.0 cM)	18012
Gene Ontology	cell differentiation | development | DNA binding | eye morphogenesis | neurogenesis | nucleus | nucleus | regulation of transcription, DNA-dependent | transcriptional activator activity
Human Homolog	NEUROD1[neurogenic differentiation 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 4 In Situ Hybridization Images

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SAGE Tags

Total 54 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AGTGCCCAGC CAGCTTCATC (2) CAGTTGCAAT 205.5 0.2055 Cb medulloblastoma CAGCTTCATC (2) CAGTTGCAAT GACAGCTCCC 111 0.111 P8 GC+1d culture AATGCAGAGG AGTGCCCAGC CAGCTTCATC (2) CAGTTGCAAT CCCCCGCATC 389.2 0.3892 P8 GC+SHH+1d culture AGTGCCCAGC CAGCTTCATC (2) CAGTTGCAAT CCCCCGCATC 347.7 0.3477 E15 cortex AATGCAGAGG 4.9 0.0049 Hypothalamus CAGTTGCAAT 1.8 0.0018 E12.5 retina CAGCTTCATC (2) CAGTTGCAAT 35.7 0.0357 E14.5 retina CAGCTTCATC (2) CAGTTGCAAT CCCCCGCATC 27.3 0.0273 E16.5 retina AATGCAGAGG CAGCTTCATC (2) CAGTTGCAAT 56.1 0.0561 E18.5 retina CAGCTTCATC (2) CAGTTGCAAT 81.8 0.0818 P0.5 retina AGTGCCCAGC CAGCTTCATC (2) CAGTTGCAAT 56.9 0.0569 P2.5 retina AGTGCCCAGC CAGCTTCATC (2) CAGTTGCAAT 216.5 0.2165 P4.5 retina CAGCTTCATC (2) CAGTTGCAAT GACAGCTCCC 362.6 0.3626 P6.5 retina AATGCAGAGG CAGCTTCATC (2) CAGTTGCAAT CCCCCGCATC GACAGCTCCC 248.5 0.2485 P10.5 crx- retina AGTGCCCAGC CAGCTTCATC (2) CAGTTGCAAT 89.2 0.0892 P10.5 crx+ retina AATGCAGAGG CAGCTTCATC (2) CAGTTGCAAT 148 0.148 Adult retinal AGTGCCCAGC CAGCTTCATC (2) CAGTTGCAAT CCCCCGCATC 88.9 0.0889 ONL AGTGCCCAGC CAGCTTCATC (2) CAGTTGCAAT 84.2 0.0842