Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.46401	AU067731	expressed sequence AU067731	16		106359
Mm.46401	Son	Son cell proliferation protein	16	16 64.0 cM	20658
Gene Ontology	DNA binding | double-stranded RNA binding | intracellular | nucleic acid binding | nucleus | protein binding | RNA binding
Human Homolog	SON[SON DNA binding protein]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 165 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAAAAAAAA (658) 203.9 0.2039 P8 Cb GC CTTGACTTTA (3) 8.2 0.0082 P8 Cb GC TGTATTACAG (5) 6.5 0.0065 P8 Cb GC TCTTTCCCTT (2) 3.3 0.0033 P8 Cb GC ATCAGTACTA (3) 1.6 0.0016 P8 Cb GC CAATAGCATT (5) 1.6 0.0016 P8 Cb GC CACAAACGGC (3) 1.6 0.0016 P8 Cb GC CCATCACTGC (9) 1.6 0.0016 P8 Cb GC CCTTATTTTC (6) 1.6 0.0016 P8 Cb GC TATTTCCACA (3) 1.6 0.0016 Cb medulloblastoma AAAAAAAAAA (658) 797.8 0.7978 Cb medulloblastoma CCATCACTGC (9) 4.6 0.0046 Cb medulloblastoma GCTGAGGGCC (4) 4.6 0.0046 Cb medulloblastoma CCTATAATCC (15) 2.3 0.0023 Cb medulloblastoma CCTTATTTTC (6) 2.3 0.0023 Cb medulloblastoma GCCAGAGCAC (7) 2.3 0.0023 Cb medulloblastoma TATTTCCACA (3) 2.3 0.0023 Cb medulloblastoma TGTATTACAG (5) 2.3 0.0023 P8 GC+1d culture AAAAAAAAAA (658) 204.3 0.2043 P8 GC+1d culture CCTTATTTTC (6) 6.8 0.0068 P8 GC+1d culture TCTTTCCCTT (2) 5.7 0.0057 P8 GC+1d culture TGTATTACAG (5) 4.6 0.0046 P8 GC+1d culture AGAACAGCAA (3) 2.3 0.0023 P8 GC+1d culture CTTGACTTTA (3) 2.3 0.0023 P8 GC+1d culture CACAAACGGC (3) 1.1 0.0011 P8 GC+1d culture CCTATAATCC (15) 1.1 0.0011 P8 GC+1d culture GAAGGACCCT (4) 1.1 0.0011 P8 GC+1d culture GATACTTTTT (5) 1.1 0.0011 P8 GC+1d culture GCCAGAGCAC (7) 1.1 0.0011 P8 GC+1d culture TATTTCCACA (3) 1.1 0.0011 P8 GC+SHH+1d culture AAAAAAAAAA (658) 278.7 0.2787 P8 GC+SHH+1d culture TGTATTACAG (5) 11.7 0.0117 P8 GC+SHH+1d culture TCTTTCCCTT (2) 4.7 0.0047 P8 GC+SHH+1d culture AGAACAGCAA (3) 3.5 0.0035 P8 GC+SHH+1d culture CTTGACTTTA (3) 3.5 0.0035 P8 GC+SHH+1d culture GAAGGACCCT (4) 3.5 0.0035 P8 GC+SHH+1d culture ATCAGTACTA (3) 1.2 0.0012 P8 GC+SHH+1d culture CAATAGCATT (5) 1.2 0.0012 P8 GC+SHH+1d culture CCTTATTTTC (6) 1.2 0.0012 P8 GC+SHH+1d culture TATTTCCACA (3) 1.2 0.0012 3T3 fibroblasts AAAAAAAAAA (658) 28 0.028 3T3 fibroblasts TGTATTACAG (5) 7 0.007 3T3 fibroblasts GCCAGAGCAC (7) 3.5 0.0035 3T3 fibroblasts GCTGAGGGCC (4) 3.5 0.0035 E15 cortex AAAAAAAAAA (658) 212.8 0.2128 E15 cortex CCTATAATCC (15) 4.9 0.0049 E15 cortex TCTTTCCCTT (2) 4.9 0.0049 P1 cortex AAAAAAAAAA (658) 245.4 0.2454 P1 cortex GGTGCCGACC (2) 9.1 0.0091 P1 cortex CACAAACGGC (3) 4.5 0.0045 P1 cortex CCTATAATCC (15) 4.5 0.0045 P1 cortex GCTGAGGGCC (4) 4.5 0.0045 Hypothalamus AAAAAAAAAA (658) 123.2 0.1232 Hypothalamus TGTATTACAG (5) 5.4 0.0054 Hypothalamus GAAATTGTAT (3) 1.8 0.0018 E12.5 retina AAAAAAAAAA (658) 138.9 0.1389 E12.5 retina TGTATTACAG (5) 18.8 0.0188 E12.5 retina CCTTATTTTC (6) 5.6 0.0056 E12.5 retina CTTGACTTTA (3) 5.6 0.0056 E12.5 retina ATCAGTACTA (3) 3.8 0.0038 E12.5 retina TCTTTCCCTT (2) 3.8 0.0038 E12.5 retina CACAAACGGC (3) 1.9 0.0019 E12.5 retina CCATCACTGC (9) 1.9 0.0019 E14.5 retina AAAAAAAAAA (658) 94.7 0.0947 E14.5 retina TGTATTACAG (5) 9.1 0.0091 E14.5 retina CTTGACTTTA (3) 3.6 0.0036 E14.5 retina CCATCACTGC (9) 1.8 0.0018 E14.5 retina CCTTATTTTC (6) 1.8 0.0018 E14.5 retina GCTGAGGGCC (4) 1.8 0.0018 E16.5 retina AAAAAAAAAA (658) 43.5 0.0435 E16.5 retina TGTATTACAG (5) 12.7 0.0127 E16.5 retina CCATCACTGC (9) 3.6 0.0036 E16.5 retina CCTATAATCC (15) 3.6 0.0036 E16.5 retina CTTGACTTTA (3) 3.6 0.0036 E16.5 retina AGAACAGCAA (3) 1.8 0.0018 E16.5 retina ATCAGTACTA (3) 1.8 0.0018 E16.5 retina CAATAGCATT (5) 1.8 0.0018 E16.5 retina CCTTATTTTC (6) 1.8 0.0018 E16.5 retina GCTGAGGGCC (4) 1.8 0.0018 E16.5 retina TATTTCCACA (3) 1.8 0.0018 E16.5 retina TTTCGGATGA (2) 1.8 0.0018 E18.5 retina AAAAAAAAAA (658) 374.7 0.3747 E18.5 retina TGTATTACAG (5) 7.3 0.0073 E18.5 retina AGAACAGCAA (3) 3.6 0.0036 E18.5 retina CTTGACTTTA (3) 3.6 0.0036 E18.5 retina TCTTTCCCTT (2) 3.6 0.0036 E18.5 retina CCATCACTGC (9) 1.8 0.0018 E18.5 retina CCTTATTTTC (6) 1.8 0.0018 E18.5 retina GAAATTGTAT (3) 1.8 0.0018 E18.5 retina GGTGCCGACC (2) 1.8 0.0018 P0.5 retina AAAAAAAAAA (658) 117.8 0.1178 P0.5 retina TGTATTACAG (5) 11.8 0.0118 P0.5 retina TCTTTCCCTT (2) 5.9 0.0059 P0.5 retina GAAGGACCCT (4) 3.9 0.0039 P0.5 retina AGAACAGCAA (3) 2 0.002 P0.5 retina CCATCACTGC (9) 2 0.002 P0.5 retina CTTGACTTTA (3) 2 0.002 P0.5 retina GCTGAGGGCC (4) 2 0.002 P2.5 retina AAAAAAAAAA (658) 329.1 0.3291 P2.5 retina TGTATTACAG (5) 17.6 0.0176 P2.5 retina AGAACAGCAA (3) 5.3 0.0053 P2.5 retina TCTTTCCCTT (2) 5.3 0.0053 P2.5 retina GCCAGAGCAC (7) 3.5 0.0035 P2.5 retina CCTATAATCC (15) 1.8 0.0018 P2.5 retina CCTTATTTTC (6) 1.8 0.0018 P2.5 retina CTTGACTTTA (3) 1.8 0.0018 P2.5 retina GAAGGACCCT (4) 1.8 0.0018 P2.5 retina GTAATTTCCA (2) 1.8 0.0018 P2.5 retina TATTTCCACA (3) 1.8 0.0018 P2.5 retina TTTCGGATGA (2) 1.8 0.0018 P4.5 retina AAAAAAAAAA (658) 283.3 0.2833 P4.5 retina TGTATTACAG (5) 23.8 0.0238 P4.5 retina ATCAGTACTA (3) 7.9 0.0079 P4.5 retina CTTGACTTTA (3) 7.9 0.0079 P4.5 retina GAAGGACCCT (4) 4 0.004 P4.5 retina TCTTTCCCTT (2) 4 0.004 P4.5 retina AGAACAGCAA (3) 2 0.002 P4.5 retina TATTTCCACA (3) 2 0.002 P6.5 retina AAAAAAAAAA (658) 266.8 0.2668 P6.5 retina TGTATTACAG (5) 11.7 0.0117 P6.5 retina AGAACAGCAA (3) 6.7 0.0067 P6.5 retina ATCAGTACTA (3) 5 0.005 P6.5 retina CTTGACTTTA (3) 5 0.005 P6.5 retina TCTTTCCCTT (2) 3.3 0.0033 P6.5 retina CATTGTGGAT (3) 1.7 0.0017 P6.5 retina CCATCACTGC (9) 1.7 0.0017 P6.5 retina CCTATAATCC (15) 1.7 0.0017 P6.5 retina GAAATTGTAT (3) 1.7 0.0017 P6.5 retina GAAGGACCCT (4) 1.7 0.0017 P6.5 retina GCCAGAGCAC (7) 1.7 0.0017 P6.5 retina TTTCGGATGA (2) 1.7 0.0017 P10.5 crx- retina AAAAAAAAAA (658) 44.6 0.0446 P10.5 crx- retina TGTATTACAG (5) 26 0.026 P10.5 crx- retina AGAACAGCAA (3) 5.6 0.0056 P10.5 crx- retina CTTGACTTTA (3) 5.6 0.0056 P10.5 crx- retina ATCAGTACTA (3) 3.7 0.0037 P10.5 crx- retina CATTGTGGAT (3) 1.9 0.0019 P10.5 crx- retina CCTTATTTTC (6) 1.9 0.0019 P10.5 crx- retina GCTGAGGGCC (4) 1.9 0.0019 P10.5 crx+ retina AAAAAAAAAA (658) 96.1 0.0961 P10.5 crx+ retina TGTATTACAG (5) 17.3 0.0173 P10.5 crx+ retina CACAAACGGC (3) 1.9 0.0019 P10.5 crx+ retina CATTGTGGAT (3) 1.9 0.0019 P10.5 crx+ retina CCATCACTGC (9) 1.9 0.0019 P10.5 crx+ retina CCTTATTTTC (6) 1.9 0.0019 P10.5 crx+ retina GCCAGAGCAC (7) 1.9 0.0019 Adult retinal AAAAAAAAAA (658) 57.4 0.0574 Adult retinal TGTATTACAG (5) 9.3 0.0093 Adult retinal ATCAGTACTA (3) 3.7 0.0037 Adult retinal CCATCACTGC (9) 3.7 0.0037 Adult retinal CTTGACTTTA (3) 3.7 0.0037 Adult retinal TCTTTCCCTT (2) 3.7 0.0037 Adult retinal AGAACAGCAA (3) 1.9 0.0019 Adult retinal CATTGTGGAT (3) 1.9 0.0019 Adult retinal GTAATTTCCA (2) 1.9 0.0019 ONL AAAAAAAAAA (658) 103.4 0.1034 ONL GATACTTTTT (5) 5.7 0.0057 ONL AGAACAGCAA (3) 3.8 0.0038 ONL CCTATAATCC (15) 3.8 0.0038 ONL TATTTCCACA (3) 3.8 0.0038 ONL TGTATTACAG (5) 3.8 0.0038 ONL CATTGTGGAT (3) 1.9 0.0019 ONL CTTGACTTTA (3) 1.9 0.0019 ONL GTAATTTCCA (2) 1.9 0.0019 ONL TCTTTCCCTT (2) 1.9 0.0019