Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.46628	Vezf1	vascular endothelial zinc finger 1	11	2 20.0 cM	22344
Gene Ontology	nucleic acid binding
Human Homolog	ZNF161[zinc finger protein 161]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 109 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCCTATGTTT 11.4 0.0114 P8 Cb GC GAGATCCTGG (5) 4.9 0.0049 P8 Cb GC GTGAAAAAAA (22) 4.9 0.0049 P8 Cb GC CAAAATACTG (3) 3.3 0.0033 P8 Cb GC CAAGACTGTC (3) 3.3 0.0033 P8 Cb GC ACCTCACCTT (3) 1.6 0.0016 P8 Cb GC AGATCCTGAA (5) 1.6 0.0016 Cb medulloblastoma GTGAAAAAAA (22) 43.9 0.0439 Cb medulloblastoma CAAAATACTG (3) 4.6 0.0046 Cb medulloblastoma AGATCCTGAA (5) 2.3 0.0023 Cb medulloblastoma CCCTATGTTT 2.3 0.0023 Cb medulloblastoma GAGATCCTGG (5) 2.3 0.0023 Cb medulloblastoma TTAGTAATAC (2) 2.3 0.0023 P8 GC+1d culture GAGATCCTGG (5) 6.8 0.0068 P8 GC+1d culture GTGAAAAAAA (22) 6.8 0.0068 P8 GC+1d culture CAAAATACTG (3) 5.7 0.0057 P8 GC+1d culture CAAGACTGTC (3) 3.4 0.0034 P8 GC+1d culture CCCTATGTTT 2.3 0.0023 P8 GC+1d culture ACCTCACCTT (3) 1.1 0.0011 P8 GC+1d culture CAGGACTGTC (2) 1.1 0.0011 P8 GC+SHH+1d culture GTGAAAAAAA (22) 10.5 0.0105 P8 GC+SHH+1d culture CCCTATGTTT 9.4 0.0094 P8 GC+SHH+1d culture CAAAATACTG (3) 4.7 0.0047 P8 GC+SHH+1d culture ACCTCACCTT (3) 3.5 0.0035 P8 GC+SHH+1d culture GAGATCCTGG (5) 3.5 0.0035 P8 GC+SHH+1d culture CAAGACTGTC (3) 1.2 0.0012 P8 GC+SHH+1d culture CATTCTGCAG 1.2 0.0012 3T3 fibroblasts GAGATCCTGG (5) 10.5 0.0105 3T3 fibroblasts CAGGACTGTC (2) 3.5 0.0035 3T3 fibroblasts CATTCTGCAG 3.5 0.0035 E15 cortex GAGATCCTGG (5) 14.8 0.0148 E15 cortex AGATCCTGAA (5) 4.9 0.0049 P1 cortex ACCTCACCTT (3) 4.5 0.0045 P1 cortex CAAAATACTG (3) 4.5 0.0045 P1 cortex GAGATCCTGG (5) 4.5 0.0045 P1 cortex TGAGAACTTA (3) 4.5 0.0045 Hypothalamus GTGAAAAAAA (22) 18.1 0.0181 Hypothalamus CAAGACTGTC (3) 10.9 0.0109 Hypothalamus CAAAACACTG (2) 3.6 0.0036 Hypothalamus GAGATCCTGG (5) 3.6 0.0036 Hypothalamus CAGGACTGTC (2) 1.8 0.0018 Hypothalamus CCCTATGTTT 1.8 0.0018 E12.5 retina GTGAAAAAAA (22) 11.3 0.0113 E12.5 retina CCCTATGTTT 7.5 0.0075 E12.5 retina AGATCCTGAA (5) 1.9 0.0019 E12.5 retina CAGGACTGTC (2) 1.9 0.0019 E12.5 retina GAGATCCTGG (5) 1.9 0.0019 E14.5 retina GTGAAAAAAA (22) 12.8 0.0128 E14.5 retina CCCTATGTTT 10.9 0.0109 E14.5 retina CAAAATACTG (3) 7.3 0.0073 E14.5 retina CAGGACTGTC (2) 3.6 0.0036 E16.5 retina CCCTATGTTT 9.1 0.0091 E16.5 retina GTGAAAAAAA (22) 5.4 0.0054 E16.5 retina ACCTCACCTT (3) 3.6 0.0036 E16.5 retina CAAAATACTG (3) 3.6 0.0036 E16.5 retina GAGATCCTGG (5) 3.6 0.0036 E16.5 retina CAAGACTGTC (3) 1.8 0.0018 E16.5 retina CAGGACTGTC (2) 1.8 0.0018 E16.5 retina CATTCTGCAG 1.8 0.0018 E18.5 retina GTGAAAAAAA (22) 20 0.02 E18.5 retina GAGATCCTGG (5) 7.3 0.0073 E18.5 retina CCCTATGTTT 3.6 0.0036 E18.5 retina CAAAATACTG (3) 1.8 0.0018 E18.5 retina CAAGACTGTC (3) 1.8 0.0018 P0.5 retina GAGATCCTGG (5) 11.8 0.0118 P0.5 retina CCCTATGTTT 9.8 0.0098 P0.5 retina GTGAAAAAAA (22) 7.9 0.0079 P0.5 retina ACCTCACCTT (3) 5.9 0.0059 P0.5 retina CAAAATACTG (3) 2 0.002 P0.5 retina CAAGACTGTC (3) 2 0.002 P0.5 retina TTAGTAATAC (2) 2 0.002 P2.5 retina GTGAAAAAAA (22) 10.6 0.0106 P2.5 retina CCCTATGTTT 8.8 0.0088 P2.5 retina CAAAATACTG (3) 7 0.007 P2.5 retina CAAGACTGTC (3) 5.3 0.0053 P4.5 retina GTGAAAAAAA (22) 23.8 0.0238 P4.5 retina CCCTATGTTT 13.9 0.0139 P4.5 retina CAAAATACTG (3) 7.9 0.0079 P4.5 retina GAGATCCTGG (5) 2 0.002 P6.5 retina CCCTATGTTT 11.7 0.0117 P6.5 retina CAAAATACTG (3) 8.3 0.0083 P6.5 retina GAGATCCTGG (5) 5 0.005 P6.5 retina GTGAAAAAAA (22) 5 0.005 P6.5 retina AGATCCTGAA (5) 1.7 0.0017 P6.5 retina CAAAACACTG (2) 1.7 0.0017 P6.5 retina CAAGACTGTC (3) 1.7 0.0017 P10.5 crx- retina CCCTATGTTT 9.3 0.0093 P10.5 crx- retina CAAAATACTG (3) 7.4 0.0074 P10.5 crx- retina GAGATCCTGG (5) 5.6 0.0056 P10.5 crx- retina GTGAAAAAAA (22) 3.7 0.0037 P10.5 crx- retina CAGGACTGTC (2) 1.9 0.0019 P10.5 crx+ retina CAAAATACTG (3) 9.6 0.0096 P10.5 crx+ retina CAAGACTGTC (3) 9.6 0.0096 P10.5 crx+ retina GTGAAAAAAA (22) 5.8 0.0058 P10.5 crx+ retina GAGATCCTGG (5) 3.8 0.0038 P10.5 crx+ retina CCCTATGTTT 1.9 0.0019 Adult retinal CAAAATACTG (3) 5.6 0.0056 Adult retinal ACCTCACCTT (3) 3.7 0.0037 Adult retinal GAGATCCTGG (5) 3.7 0.0037 Adult retinal GTGAAAAAAA (22) 3.7 0.0037 Adult retinal CAGGACTGTC (2) 1.9 0.0019 Adult retinal CCCTATGTTT 1.9 0.0019 Adult retinal TGAGAACTTA (3) 1.9 0.0019 ONL CCCTATGTTT 13.4 0.0134 ONL GTGAAAAAAA (22) 5.7 0.0057 ONL ACCTCACCTT (3) 1.9 0.0019 ONL CAAAATACTG (3) 1.9 0.0019 ONL CAGGACTGTC (2) 1.9 0.0019 ONL TTAGTAATAC (2) 1.9 0.0019