Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.46749	Slc7a6	solute carrier family 7 (cationic amino acid transporter, y+ system), member 6	8		330836
Gene Ontology	integral to membrane | transport
Human Homolog	SLC7A6[solute carrier family 7 (cationic amino acid transporter, y+ system), member 6]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 51 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GAAAGTTGGC (2) 6.5 0.0065 P8 Cb GC AGTCATAATA 3.3 0.0033 P8 Cb GC GGGATTGCCC (2) 1.6 0.0016 Cb medulloblastoma GAAAGTTGGC (2) 43.9 0.0439 Cb medulloblastoma ATCCATATTG (2) 2.3 0.0023 P8 GC+1d culture GAAAGTTGGC (2) 9.1 0.0091 P8 GC+1d culture ATCCATATTG (2) 5.7 0.0057 P8 GC+1d culture GGACAGTATA 2.3 0.0023 P8 GC+1d culture GGGATTGCCC (2) 1.1 0.0011 P8 GC+SHH+1d culture GAAAGTTGGC (2) 14.1 0.0141 P8 GC+SHH+1d culture GGGATTGCCC (2) 3.5 0.0035 P8 GC+SHH+1d culture AGTCATAATA 1.2 0.0012 P8 GC+SHH+1d culture ATCCATATTG (2) 1.2 0.0012 P8 GC+SHH+1d culture GGACAGTATA 1.2 0.0012 3T3 fibroblasts ATCCATATTG (2) 7 0.007 3T3 fibroblasts GAAAGTTGGC (2) 3.5 0.0035 3T3 fibroblasts GGGATTGCCC (2) 3.5 0.0035 E15 cortex ATCCATATTG (2) 19.8 0.0198 E15 cortex GAAAGTTGGC (2) 4.9 0.0049 P1 cortex GAAAGTTGGC (2) 4.5 0.0045 Hypothalamus GAAAGTTGGC (2) 29 0.029 E12.5 retina ACCCAAGCAT 1.9 0.0019 E12.5 retina GGGATTGCCC (2) 1.9 0.0019 E14.5 retina ACCCAAGCAT 5.5 0.0055 E14.5 retina GGGATTGCCC (2) 3.6 0.0036 E16.5 retina ACCCAAGCAT 14.5 0.0145 E16.5 retina AGTCATAATA 3.6 0.0036 E18.5 retina ACCCAAGCAT 7.3 0.0073 E18.5 retina AGTCATAATA 1.8 0.0018 E18.5 retina ATCCATATTG (2) 1.8 0.0018 P0.5 retina ATCCATATTG (2) 5.9 0.0059 P0.5 retina GAAAGTTGGC (2) 3.9 0.0039 P0.5 retina ACCCAAGCAT 2 0.002 P2.5 retina ATCCATATTG (2) 3.5 0.0035 P2.5 retina AGTCATAATA 1.8 0.0018 P2.5 retina GGGATTGCCC (2) 1.8 0.0018 P4.5 retina ACCCAAGCAT 4 0.004 P4.5 retina AGTCATAATA 2 0.002 P4.5 retina ATCCATATTG (2) 2 0.002 P4.5 retina GAAAGTTGGC (2) 2 0.002 P4.5 retina GGGATTGCCC (2) 2 0.002 P6.5 retina GAAAGTTGGC (2) 3.3 0.0033 P6.5 retina GGGATTGCCC (2) 1.7 0.0017 P10.5 crx- retina ACCCAAGCAT 13 0.013 P10.5 crx- retina ATCCATATTG (2) 1.9 0.0019 P10.5 crx- retina GGGATTGCCC (2) 1.9 0.0019 P10.5 crx+ retina ACCCAAGCAT 3.8 0.0038 P10.5 crx+ retina GGGATTGCCC (2) 1.9 0.0019 Adult retinal GGGATTGCCC (2) 7.4 0.0074 ONL GGGATTGCCC (2) 3.8 0.0038 ONL ATCCATATTG (2) 1.9 0.0019