Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.47904
2410004F06Rik
RIKEN cDNA 2410004F06 gene
7
71981
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 94 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CTAATAAACG (
6
)
24.5
0.0245
P8 Cb GC
TGTGTTTTGG
(
5
)
17.9
0.0179
P8 Cb GC
CGCCACCACT (
9
)
4.9
0.0049
P8 Cb GC
GTGAAAAAAA (
22
)
4.9
0.0049
P8 Cb GC
GTCGTGCCAT
3.3
0.0033
Cb medulloblastoma
GTGAAAAAAA (
22
)
43.9
0.0439
Cb medulloblastoma
TGTGTTTTGG
(
5
)
13.9
0.0139
Cb medulloblastoma
CTAATAAACG (
6
)
11.6
0.0116
Cb medulloblastoma
GTCGTGCCAT
9.2
0.0092
Cb medulloblastoma
CGCCACCACT (
9
)
4.6
0.0046
P8 GC+1d culture
TGTGTTTTGG
(
5
)
21.7
0.0217
P8 GC+1d culture
CTAATAAACG (
6
)
11.4
0.0114
P8 GC+1d culture
GTGAAAAAAA (
22
)
6.8
0.0068
P8 GC+1d culture
GTCGTGCCAT
2.3
0.0023
P8 GC+1d culture
GGCAGGGGTG (
7
)
1.1
0.0011
P8 GC+SHH+1d culture
CTAATAAACG (
6
)
23.4
0.0234
P8 GC+SHH+1d culture
TGTGTTTTGG
(
5
)
14.1
0.0141
P8 GC+SHH+1d culture
GTGAAAAAAA (
22
)
10.5
0.0105
P8 GC+SHH+1d culture
CGCCACCACT (
9
)
7
0.007
P8 GC+SHH+1d culture
GTCGTGCCAT
1.2
0.0012
3T3 fibroblasts
CGCCACCACT (
9
)
3.5
0.0035
E15 cortex
CGCCACCACT (
9
)
14.8
0.0148
E15 cortex
GGCAGGGGTG (
7
)
4.9
0.0049
E15 cortex
TGTGTTTTGG
(
5
)
4.9
0.0049
P1 cortex
CTAATAAACG (
6
)
13.6
0.0136
P1 cortex
GTCGTGCCAT
4.5
0.0045
Hypothalamus
GTGAAAAAAA (
22
)
18.1
0.0181
Hypothalamus
CTAATAAACG (
6
)
14.5
0.0145
Hypothalamus
GTCGTGCCAT
10.9
0.0109
Hypothalamus
CGCCACCACT (
9
)
5.4
0.0054
Hypothalamus
TGTGTTTTGG
(
5
)
3.6
0.0036
Hypothalamus
GGCAGGGGTG (
7
)
1.8
0.0018
E12.5 retina
CTAATAAACG (
6
)
24.4
0.0244
E12.5 retina
GTGAAAAAAA (
22
)
11.3
0.0113
E12.5 retina
GTCGTGCCAT
9.4
0.0094
E12.5 retina
TGTGTTTTGG
(
5
)
7.5
0.0075
E12.5 retina
CGCCACCACT (
9
)
3.8
0.0038
E14.5 retina
CTAATAAACG (
6
)
16.4
0.0164
E14.5 retina
GTGAAAAAAA (
22
)
12.8
0.0128
E14.5 retina
CGCCACCACT (
9
)
1.8
0.0018
E14.5 retina
GGCAGGGGTG (
7
)
1.8
0.0018
E14.5 retina
GTCGTGCCAT
1.8
0.0018
E16.5 retina
CTAATAAACG (
6
)
38
0.038
E16.5 retina
GTCGTGCCAT
7.2
0.0072
E16.5 retina
GTGAAAAAAA (
22
)
5.4
0.0054
E16.5 retina
CGCCACCACT (
9
)
3.6
0.0036
E16.5 retina
TGTGTTTTGG
(
5
)
1.8
0.0018
E18.5 retina
CTAATAAACG (
6
)
40
0.04
E18.5 retina
GTGAAAAAAA (
22
)
20
0.02
E18.5 retina
TGTGTTTTGG
(
5
)
9.1
0.0091
E18.5 retina
CGCCACCACT (
9
)
3.6
0.0036
E18.5 retina
GTCGTGCCAT
1.8
0.0018
P0.5 retina
GTGAAAAAAA (
22
)
7.9
0.0079
P0.5 retina
CTAATAAACG (
6
)
3.9
0.0039
P0.5 retina
GTCGTGCCAT
3.9
0.0039
P2.5 retina
CTAATAAACG (
6
)
22.9
0.0229
P2.5 retina
GTGAAAAAAA (
22
)
10.6
0.0106
P2.5 retina
GGCAGGGGTG (
7
)
7
0.007
P2.5 retina
TGTGTTTTGG
(
5
)
7
0.007
P2.5 retina
GTCGTGCCAT
3.5
0.0035
P2.5 retina
CGCCACCACT (
9
)
1.8
0.0018
P4.5 retina
CTAATAAACG (
6
)
37.6
0.0376
P4.5 retina
GTGAAAAAAA (
22
)
23.8
0.0238
P4.5 retina
GTCGTGCCAT
7.9
0.0079
P4.5 retina
CGCCACCACT (
9
)
5.9
0.0059
P4.5 retina
TGTGTTTTGG
(
5
)
4
0.004
P6.5 retina
CTAATAAACG (
6
)
26.7
0.0267
P6.5 retina
GTGAAAAAAA (
22
)
5
0.005
P6.5 retina
TGTGTTTTGG
(
5
)
5
0.005
P6.5 retina
CGCCACCACT (
9
)
3.3
0.0033
P6.5 retina
GTCGTGCCAT
3.3
0.0033
P10.5 crx- retina
GTCGTGCCAT
7.4
0.0074
P10.5 crx- retina
CTAATAAACG (
6
)
5.6
0.0056
P10.5 crx- retina
CGCCACCACT (
9
)
3.7
0.0037
P10.5 crx- retina
GTGAAAAAAA (
22
)
3.7
0.0037
P10.5 crx- retina
TGTGTTTTGG
(
5
)
3.7
0.0037
P10.5 crx- retina
GGCAGGGGTG (
7
)
1.9
0.0019
P10.5 crx+ retina
GTCGTGCCAT
11.5
0.0115
P10.5 crx+ retina
CTAATAAACG (
6
)
7.7
0.0077
P10.5 crx+ retina
GTGAAAAAAA (
22
)
5.8
0.0058
P10.5 crx+ retina
TGTGTTTTGG
(
5
)
5.8
0.0058
P10.5 crx+ retina
CGCCACCACT (
9
)
1.9
0.0019
P10.5 crx+ retina
GGCAGGGGTG (
7
)
1.9
0.0019
Adult retinal
CGCCACCACT (
9
)
7.4
0.0074
Adult retinal
GGCAGGGGTG (
7
)
5.6
0.0056
Adult retinal
CTAATAAACG (
6
)
3.7
0.0037
Adult retinal
GTGAAAAAAA (
22
)
3.7
0.0037
Adult retinal
GTCGTGCCAT
1.9
0.0019
Adult retinal
TGTGTTTTGG
(
5
)
1.9
0.0019
ONL
CGCCACCACT (
9
)
5.7
0.0057
ONL
CTAATAAACG (
6
)
5.7
0.0057
ONL
GTGAAAAAAA (
22
)
5.7
0.0057
ONL
TGTGTTTTGG
(
5
)
5.7
0.0057
ONL
GTCGTGCCAT
1.9
0.0019
