Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.486	Lamp2	lysosomal membrane glycoprotein 2	X	X 13.0 cM	16784
Gene Ontology	ATP binding | integral to membrane | lysosome | lysosome | membrane | tRNA aminoacylation for protein translation | tRNA ligase activity
Human Homolog	LAMP2[lysosomal-associated membrane protein 2]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 67 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GACCAGTTTC GGCCAGTTTA TTTTCTCTTC (2) TTTTTGAATA (2) 11.4 0.0114 Cb medulloblastoma GACCAGTTTC GGGCTGCAGC TTTTCTCTTC (2) 9.2 0.0092 P8 GC+1d culture ACAAATACAT GACCAGTTTC GGCCAGTTTA TCATCTTTAA (2) TCTGTGACTG (2) TTTTCTCTTC (2) TTTTTGAATA (2) 30.6 0.0306 P8 GC+SHH+1d culture ACAAATACAT GACCAGTTTC GGCCAGTTTA GGGCTGCAGC TCATCTTTAA (2) TCTGTGACTG (2) TTTTCTCTTC (2) 22.2 0.0222 3T3 fibroblasts ACCATTATAA TCATCTTTAA (2) TTTTTGAATA (2) 14 0.014 E15 cortex GGGGGAGTGA 19.8 0.0198 P1 cortex GGGGGAGTGA TCATCTTTAA (2) 9 0.009 Hypothalamus ACCATTATAA GGGCTGCAGC TCATCTTTAA (2) TTTTCTCTTC (2) 7.2 0.0072 E12.5 retina ACCATTATAA TTTTCTCTTC (2) TTTTTGAATA (2) 5.7 0.0057 E14.5 retina ACCATTATAA GACCAGTTTC TTTTCTCTTC (2) 7.2 0.0072 E16.5 retina ACCATTATAA TCTGTGACTG (2) TTTTCTCTTC (2) TTTTTGAATA (2) 9 0.009 E18.5 retina GACCAGTTTC 1.8 0.0018 P0.5 retina GGGGGAGTGA TCATCTTTAA (2) TTTTCTCTTC (2) 6 0.006 P2.5 retina GACCAGTTTC TCATCTTTAA (2) TCTGTGACTG (2) TTTTCTCTTC (2) 10.6 0.0106 P4.5 retina ACCATTATAA GGGCTGCAGC TCATCTTTAA (2) TTTTTGAATA (2) 15.9 0.0159 P6.5 retina TCATCTTTAA (2) TTTTCTCTTC (2) 3.4 0.0034 P10.5 crx- retina ACCATTATAA TCTGTGACTG (2) 9.3 0.0093 P10.5 crx+ retina GACCAGTTTC GGGCTGCAGC TCATCTTTAA (2) TTTTTGAATA (2) 7.6 0.0076 Adult retinal TCATCTTTAA (2) TTTTCTCTTC (2) 3.8 0.0038 ONL GACCAGTTTC GGCCAGTTTA TCATCTTTAA (2) TTTTCTCTTC (2) 7.6 0.0076