Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.48686	Ppp4r1	protein phosphatase 4, regulatory subunit 1	17		70351
Gene Ontology	phosphoprotein phosphatase activity
Human Homolog	PPP4R1[protein phosphatase 4, regulatory subunit 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 49 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CTGTTAGAAC 14.7 0.0147 P8 Cb GC ACCTGAAGGA (3) 1.6 0.0016 P8 Cb GC CTTTAAGATG (3) 1.6 0.0016 P8 Cb GC GTCAGCTCTG 1.6 0.0016 Cb medulloblastoma CAGTGGAAAG (6) 2.3 0.0023 Cb medulloblastoma CTGTTAGAAC 2.3 0.0023 Cb medulloblastoma CTTTAAGATG (3) 2.3 0.0023 P8 GC+1d culture CTGTTAGAAC 12.6 0.0126 P8 GC+1d culture CTTTAAGATG (3) 6.8 0.0068 P8 GC+SHH+1d culture CTGTTAGAAC 2.3 0.0023 P8 GC+SHH+1d culture CTTTAAGATG (3) 2.3 0.0023 3T3 fibroblasts CTGTTAGAAC 7 0.007 3T3 fibroblasts CAGTGGAAAG (6) 3.5 0.0035 P1 cortex CTGTTAGAAC 4.5 0.0045 P1 cortex CTTTAAGATG (3) 4.5 0.0045 Hypothalamus CTGTTAGAAC 5.4 0.0054 Hypothalamus GTCAGCTCTG 5.4 0.0054 Hypothalamus CAGTGGAAAG (6) 1.8 0.0018 Hypothalamus CTTTAAGATG (3) 1.8 0.0018 Hypothalamus GGTTGGAAGG (6) 1.8 0.0018 E12.5 retina CTGTTAGAAC 3.8 0.0038 E12.5 retina CAGTGGAAAG (6) 1.9 0.0019 E14.5 retina CTGTTAGAAC 7.3 0.0073 E14.5 retina ACCTGAAGGA (3) 1.8 0.0018 E14.5 retina GGTTGGAAGG (6) 1.8 0.0018 E16.5 retina CTGTTAGAAC 3.6 0.0036 E16.5 retina ACCTGAAGGA (3) 1.8 0.0018 E18.5 retina CTGTTAGAAC 3.6 0.0036 P0.5 retina ACCTGAAGGA (3) 2 0.002 P2.5 retina CTGTTAGAAC 5.3 0.0053 P2.5 retina CTTTAAGATG (3) 1.8 0.0018 P4.5 retina CTGTTAGAAC 11.9 0.0119 P4.5 retina ACCTGAAGGA (3) 2 0.002 P6.5 retina CTGTTAGAAC 8.3 0.0083 P6.5 retina CAGTGGAAAG (6) 6.7 0.0067 P6.5 retina CTTTAAGATG (3) 5 0.005 P6.5 retina GGTTGGAAGG (6) 3.3 0.0033 P10.5 crx- retina CTGTTAGAAC 3.7 0.0037 P10.5 crx- retina CTTTAAGATG (3) 3.7 0.0037 P10.5 crx- retina CAGTGGAAAG (6) 1.9 0.0019 P10.5 crx+ retina CTTTAAGATG (3) 3.8 0.0038 P10.5 crx+ retina CAGTGGAAAG (6) 1.9 0.0019 P10.5 crx+ retina CTGTTAGAAC 1.9 0.0019 Adult retinal CAGTGGAAAG (6) 11.1 0.0111 Adult retinal CTGTTAGAAC 5.6 0.0056 Adult retinal CTTTAAGATG (3) 5.6 0.0056 ONL CAGTGGAAAG (6) 3.8 0.0038 ONL CTGTTAGAAC 3.8 0.0038 ONL CTTTAAGATG (3) 3.8 0.0038