Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.4920	Gria1	glutamate receptor, ionotropic, AMPA1 (alpha 1)	11	11 31.0 cM	14799
Gene Ontology	extracellular space | glutamate-gated ion channel activity | inotropic glutamate receptor activity | integral to membrane | ion channel activity | ion transport | membrane | potassium channel activity | potassium ion transport | protein amino acid prenylation | protein binding | protein prenyltransferase activity | receptor activity | synaptic transmission | transport | transporter activity
Human Homolog	GRIA1[glutamate receptor, ionotropic, AMPA 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 40 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CAGAGATCCC CGGCTTTTAG (2) 11.4 0.0114 Cb medulloblastoma ACTCCGGGGA AGCCACAGTT CAGAGATCCC CAGGGAATGG 27.7 0.0277 P8 GC+1d culture CAGAGATCCC CGGCTTTTAG (2) 3.4 0.0034 P8 GC+SHH+1d culture CAGAGATCCC CGGCTTTTAG (2) 5.9 0.0059 3T3 fibroblasts CAGAGATCCC 38.6 0.0386 E15 cortex ACTCCGGGGA CAGAGATCCC CGGCTTTTAG (2) 19.7 0.0197 P1 cortex ACTCCGGGGA AGCCACAGTT 13.6 0.0136 Hypothalamus ACTCCGGGGA CAGAGATCCC 12.7 0.0127 E12.5 retina CAGAGATCCC 9.4 0.0094 E14.5 retina CAGAGATCCC 5.5 0.0055 E16.5 retina CAGAGATCCC CAGGGAATGG 10.9 0.0109 E18.5 retina CAGAGATCCC 5.5 0.0055 P0.5 retina CAGAGATCCC CGGCTTTTAG (2) 21.6 0.0216 P2.5 retina CAGAGATCCC CAGGGAATGG CGGCTTTTAG (2) 23 0.023 P4.5 retina CAGAGATCCC CAGGGAATGG 6 0.006 P6.5 retina CAGGGAATGG CGGCTTTTAG (2) 5 0.005 P10.5 crx- retina ACTCCGGGGA CAGGGAATGG CGGCTTTTAG (2) 7.5 0.0075 P10.5 crx+ retina ACTCCGGGGA CAGGGAATGG 3.8 0.0038 Adult retinal ACTCCGGGGA CAGAGATCCC CGGCTTTTAG (2) 5.7 0.0057