Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.49994	Hook1	hook homolog 1 (Drosophila)	4	4 45.5 cM	77963
Gene Ontology	cytoplasm | cytoskeleton | microtubule | microtubule binding | microtubule cytoskeleton organization and biogenesis | spermatogenesis
Human Homolog	HOOK1[hook homolog 1 (Drosophila)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 41 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAGCAATGG 1.6 0.0016 P8 Cb GC ACTTCTCCAA (2) 1.6 0.0016 P8 Cb GC GCAGAAAGTG (8) 1.6 0.0016 Cb medulloblastoma GCAGAAAGTG (8) 4.6 0.0046 P8 GC+1d culture ACTTCTCCAA (2) 1.1 0.0011 P8 GC+SHH+1d culture TGGGGAGTGA 3.5 0.0035 P8 GC+SHH+1d culture GAACTGACTG (2) 1.2 0.0012 E15 cortex GCAGAAAGTG (8) 4.9 0.0049 E15 cortex TGGGGAGTGA 4.9 0.0049 P1 cortex TGGGGAGTGA 4.5 0.0045 Hypothalamus GCAGAAAGTG (8) 9.1 0.0091 Hypothalamus GAACTGACTG (2) 5.4 0.0054 Hypothalamus TGGGGAGTGA 1.8 0.0018 E12.5 retina GAACTGACTG (2) 1.9 0.0019 E12.5 retina TGGGGAGTGA 1.9 0.0019 E16.5 retina TGGGGAGTGA 5.4 0.0054 E16.5 retina ACTTCTCCAA (2) 1.8 0.0018 E18.5 retina GAACTGACTG (2) 3.6 0.0036 E18.5 retina GCAGAAAGTG (8) 1.8 0.0018 E18.5 retina TGGGGAGTGA 1.8 0.0018 P0.5 retina TGGGGAGTGA 15.7 0.0157 P0.5 retina ACTTCTCCAA (2) 2 0.002 P0.5 retina GCAGAAAGTG (8) 2 0.002 P2.5 retina GAACTGACTG (2) 5.3 0.0053 P2.5 retina TGGGGAGTGA 5.3 0.0053 P2.5 retina GCAGAAAGTG (8) 3.5 0.0035 P4.5 retina GAACTGACTG (2) 5.9 0.0059 P4.5 retina TGGGGAGTGA 4 0.004 P6.5 retina TGGGGAGTGA 11.7 0.0117 P6.5 retina GAACTGACTG (2) 1.7 0.0017 P6.5 retina GCAGAAAGTG (8) 1.7 0.0017 P10.5 crx- retina GCAGAAAGTG (8) 1.9 0.0019 P10.5 crx- retina TGGGGAGTGA 1.9 0.0019 P10.5 crx+ retina GCAGAAAGTG (8) 5.8 0.0058 P10.5 crx+ retina AAAGCAATGG 1.9 0.0019 P10.5 crx+ retina TGGGGAGTGA 1.9 0.0019 Adult retinal TGGGGAGTGA 16.7 0.0167 Adult retinal GCAGAAAGTG (8) 5.6 0.0056 ONL TGGGGAGTGA 5.7 0.0057 ONL GCAGAAAGTG (8) 3.8 0.0038 ONL AAAGCAATGG 1.9 0.0019