Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.5022	Mmp13	matrix metalloproteinase 13	9		17386
Gene Ontology	calcium ion binding | collagen catabolism | extracellular matrix | extracellular space | hydrolase activity | interstitial collagenase activity | metalloendopeptidase activity | metallopeptidase activity | proteolysis and peptidolysis | zinc ion binding
Human Homolog	MMP13[matrix metalloproteinase 13 (collagenase 3)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 41 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  Cb medulloblastoma ACAAAACCAA (6) 4.6 0.0046 Cb medulloblastoma AGAAAAACAA (7) 2.3 0.0023 Cb medulloblastoma GTGGATCACA (7) 2.3 0.0023 P8 GC+1d culture GTGGATCACA (7) 2.3 0.0023 P8 GC+1d culture TTTGTTAATC (3) 2.3 0.0023 P8 GC+1d culture AGAAAAACAA (7) 1.1 0.0011 P8 GC+SHH+1d culture GTGGATCACA (7) 3.5 0.0035 P8 GC+SHH+1d culture TTTGTTAATC (3) 3.5 0.0035 P8 GC+SHH+1d culture ACAAAACCAA (6) 1.2 0.0012 P8 GC+SHH+1d culture GTGGAGCAGA (4) 1.2 0.0012 3T3 fibroblasts GTGGAGCACA (9) 14 0.014 E15 cortex ACAAAACCAA (6) 4.9 0.0049 E15 cortex GTGGATCACA (7) 4.9 0.0049 P1 cortex GTGGAGCACA (9) 18.2 0.0182 Hypothalamus ACAAAACCAA (6) 1.8 0.0018 Hypothalamus AGAAAAACAA (7) 1.8 0.0018 Hypothalamus AGAAAACCAA (8) 1.8 0.0018 Hypothalamus GTGGATCACA (7) 1.8 0.0018 E12.5 retina GTGGATCACA (7) 3.8 0.0038 E14.5 retina ACAAAACCAA (6) 20 0.02 E14.5 retina GTGGATCACA (7) 3.6 0.0036 E16.5 retina GTGGATCACA (7) 5.4 0.0054 E16.5 retina ACAAAACCAA (6) 1.8 0.0018 E18.5 retina ACAAAACCAA (6) 1.8 0.0018 E18.5 retina TTTGTTAATC (3) 1.8 0.0018 P0.5 retina GTGGAGCACA (9) 3.9 0.0039 P0.5 retina GTGGATCACA (7) 2 0.002 P4.5 retina GTGGATCACA (7) 5.9 0.0059 P6.5 retina GTGGAGCACA (9) 3.3 0.0033 P6.5 retina GTGGATCACA (7) 3.3 0.0033 P6.5 retina ACAAAACCAA (6) 1.7 0.0017 P6.5 retina GTGGAGCAGA (4) 1.7 0.0017 P10.5 crx+ retina GTGGAGCACA (9) 1.9 0.0019 P10.5 crx+ retina GTGGATCACA (7) 1.9 0.0019 Adult retinal ACAAAACCAA (6) 9.3 0.0093 Adult retinal GTGGATCACA (7) 3.7 0.0037 Adult retinal GTGGAGCACA (9) 1.9 0.0019 ONL ACAAAACCAA (6) 49.8 0.0498 ONL AGAAAACCAA (8) 3.8 0.0038 ONL GTGGATCACA (7) 3.8 0.0038 ONL GTGGAGCACA (9) 1.9 0.0019