Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.50424	Tax1bp1	Tax1 (human T-cell leukemia virus type I) binding protein 1	6	6 B3 (6 26.0 cM)	52440
Mm.50424	1700069J21Rik	RIKEN cDNA 1700069J21 gene	6		73506
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 88 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ACCACTGATA (2) GCCCCCCTCT (2) GTTTCTGAAG TCATTTTTCA 18 0.018 Cb medulloblastoma ACCACTGATA (2) AGAGAGAGCA (3) CTCTTGCTTT (3) GCCCCCCTCT (2) TATTTTCAAA TTTATGTTTG (2) 37 0.037 P8 GC+1d culture ACCACTGATA (2) CTCTTGCTTT (3) GAGCAGGCTT (3) GCCCCCCTCT (2) TATTTTCAAA TCATTTTTCA 34.1 0.0341 P8 GC+SHH+1d culture ACCACTGATA (2) GCCCCCCTCT (2) GTTTCTGAAG TATTTTCAAA TCTGTGAAAT (2) TTTATGTTTG (2) 22.3 0.0223 3T3 fibroblasts TCTGTGAAAT (2) 3.5 0.0035 E15 cortex AGAGAGAGCA (3) GCCCCCCTCT (2) 64.3 0.0643 P1 cortex ACCACTGATA (2) AGAGAGAGCA (3) GCCCCCCTCT (2) 95.4 0.0954 Hypothalamus ACCACTGATA (2) ACCCCTGATA (2) GCCCCCCTCT (2) GTTTCTGAAG TCATTTTTCA 30.8 0.0308 E12.5 retina ACCACTGATA (2) CTCTTGCTTT (3) GTTTCTGAAG TCATTTTTCA 11.4 0.0114 E14.5 retina ACCACTGATA (2) GTTTCTGAAG TCATTTTTCA TTTATGTTTG (2) 20 0.02 E16.5 retina ACCACTGATA (2) ACCCCTGATA (2) CTCTTGCTTT (3) TCATTTTTCA TTCTGAGCAA (2) TTTATGTTTG (2) 28.9 0.0289 E18.5 retina ACCACTGATA (2) GCCCCCCTCT (2) GTTTCTGAAG TCATTTTTCA 25.4 0.0254 P0.5 retina ACCACTGATA (2) CTCTTGCTTT (3) GCCCCCCTCT (2) GTTTCTGAAG TCATTTTTCA 31.4 0.0314 P2.5 retina ACCACTGATA (2) GCCCCCCTCT (2) GTTTCTGAAG TATTTTCAAA TCATTTTTCA 40.6 0.0406 P4.5 retina ACCACTGATA (2) GCCCCCCTCT (2) GTTTCTGAAG 35.7 0.0357 P6.5 retina ACCACTGATA (2) CTCTTGCTTT (3) GCCCCCCTCT (2) TCATTTTTCA 61.7 0.0617 P10.5 crx- retina ACCACTGATA (2) CTCTTGCTTT (3) GCCCCCCTCT (2) GTTTCTGAAG TCATTTTTCA TCTGTGAAAT (2) TTCTGAGCAA (2) 70.7 0.0707 P10.5 crx+ retina ACCACTGATA (2) GAGCAGGCTT (3) GCCCCCCTCT (2) TATTTTCAAA TTTATGTTTG (2) 88.3 0.0883 Adult retinal ACCACTGATA (2) CTCTTGCTTT (3) GCCCCCCTCT (2) GTTTCTGAAG 76 0.076 ONL ACCACTGATA (2) CTCTTGCTTT (3) GCCCCCCTCT (2) TTCTGAGCAA (2) 76.5 0.0765