Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.5048	Mcm5	minichromosome maintenance deficient 5, cell division cycle 46 (S. cerevisiae)	8		17218
Gene Ontology	ATP binding | DNA binding | DNA dependent ATPase activity | DNA replication | DNA replication initiation | nucleus | regulation of transcription, DNA-dependent
Human Homolog	MCM5[MCM5 minichromosome maintenance deficient 5, cell division cycle 46 (S. cerevisiae)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 79 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CAAAAAAAAA (157) 47.3 0.0473 P8 Cb GC GAAAGGTGGA (4) 3.3 0.0033 P8 Cb GC GATATGAAGA (5) 3.3 0.0033 Cb medulloblastoma CAAAAAAAAA (157) 92.5 0.0925 Cb medulloblastoma TATGCACCTG (2) 4.6 0.0046 Cb medulloblastoma AAAGGGGATA 2.3 0.0023 Cb medulloblastoma CTCCCATCCT (6) 2.3 0.0023 P8 GC+1d culture CAAAAAAAAA (157) 37.7 0.0377 P8 GC+1d culture AAAGGAAACG 1.1 0.0011 P8 GC+1d culture AAAGGGGATA 1.1 0.0011 P8 GC+1d culture CCTTCTCAAC (2) 1.1 0.0011 P8 GC+1d culture CTCCCATCCT (6) 1.1 0.0011 P8 GC+1d culture GAAAGGTGGA (4) 1.1 0.0011 P8 GC+1d culture GGTGAGATCC (7) 1.1 0.0011 P8 GC+SHH+1d culture CAAAAAAAAA (157) 58.5 0.0585 P8 GC+SHH+1d culture CCTTCTCAAC (2) 5.9 0.0059 P8 GC+SHH+1d culture GGTGAGATCC (7) 2.3 0.0023 P8 GC+SHH+1d culture CTCCCATCCT (6) 1.2 0.0012 P8 GC+SHH+1d culture TATGCACCTG (2) 1.2 0.0012 3T3 fibroblasts TATGCACCTG (2) 14 0.014 3T3 fibroblasts GTCATAGCTG (590) 10.5 0.0105 3T3 fibroblasts CTCCCATCCT (6) 7 0.007 3T3 fibroblasts GGTGAGATCC (7) 3.5 0.0035 E15 cortex CAAAAAAAAA (157) 34.6 0.0346 E15 cortex GGTGAGATCC (7) 14.8 0.0148 E15 cortex CCTTCTCAAC (2) 4.9 0.0049 E15 cortex GTCATAGCTG (590) 4.9 0.0049 P1 cortex CAAAAAAAAA (157) 22.7 0.0227 Hypothalamus CAAAAAAAAA (157) 39.8 0.0398 Hypothalamus CCTTCTCAAC (2) 1.8 0.0018 Hypothalamus CTCCCATCCT (6) 1.8 0.0018 Hypothalamus GAAAGGTGGA (4) 1.8 0.0018 Hypothalamus GGTGAGATCC (7) 1.8 0.0018 Hypothalamus TATGCACCTG (2) 1.8 0.0018 E12.5 retina CAAAAAAAAA (157) 22.5 0.0225 E12.5 retina CCTTCTCAAC (2) 5.6 0.0056 E12.5 retina GGTGAGATCC (7) 1.9 0.0019 E14.5 retina CAAAAAAAAA (157) 9.1 0.0091 E14.5 retina AAAGGGGATA 1.8 0.0018 E14.5 retina ACAGGGGATA (2) 1.8 0.0018 E14.5 retina CCTTCTCAAC (2) 1.8 0.0018 E16.5 retina CAAAAAAAAA (157) 9.1 0.0091 E16.5 retina CCTTCTCAAC (2) 5.4 0.0054 E16.5 retina ACAGGGGATA (2) 3.6 0.0036 E16.5 retina CTCCGCCAGG (2) 1.8 0.0018 E18.5 retina CAAAAAAAAA (157) 41.8 0.0418 E18.5 retina ACAGGGGATA (2) 1.8 0.0018 E18.5 retina CCTTCTCAAC (2) 1.8 0.0018 E18.5 retina GGTGAGATCC (7) 1.8 0.0018 E18.5 retina TATGCACCTG (2) 1.8 0.0018 P0.5 retina CAAAAAAAAA (157) 137.4 0.1374 P0.5 retina GTCATAGCTG (590) 3.9 0.0039 P0.5 retina CCTTCTCAAC (2) 2 0.002 P2.5 retina CAAAAAAAAA (157) 52.8 0.0528 P2.5 retina GGTGAGATCC (7) 1.8 0.0018 P2.5 retina GTCATAGCTG (590) 1.8 0.0018 P4.5 retina CAAAAAAAAA (157) 41.6 0.0416 P4.5 retina CTCCCATCCT (6) 2 0.002 P4.5 retina GTCATAGCTG (590) 2 0.002 P6.5 retina CAAAAAAAAA (157) 31.7 0.0317 P6.5 retina GTCATAGCTG (590) 3.3 0.0033 P6.5 retina CCTTCTCAAC (2) 1.7 0.0017 P6.5 retina CTCCGCCAGG (2) 1.7 0.0017 P6.5 retina GGTGAGATCC (7) 1.7 0.0017 P10.5 crx- retina CAAAAAAAAA (157) 13 0.013 P10.5 crx- retina CTCCCATCCT (6) 1.9 0.0019 P10.5 crx- retina CTCCGCCAGG (2) 1.9 0.0019 P10.5 crx- retina GGTGAGATCC (7) 1.9 0.0019 P10.5 crx+ retina CAAAAAAAAA (157) 32.7 0.0327 P10.5 crx+ retina CTCCCATCCT (6) 1.9 0.0019 P10.5 crx+ retina GAAAGGTGGA (4) 1.9 0.0019 Adult retinal CAAAAAAAAA (157) 20.4 0.0204 Adult retinal CTCCCATCCT (6) 5.6 0.0056 Adult retinal GGTGAGATCC (7) 1.9 0.0019 Adult retinal GTCATAGCTG (590) 1.9 0.0019 ONL CAAAAAAAAA (157) 17.2 0.0172 ONL GTCATAGCTG (590) 5.7 0.0057 ONL AAAGGAAACG 3.8 0.0038 ONL AAAGGGGATA 3.8 0.0038