Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.5068	Sh3d4	SH3 domain protein 4	14	14 34.5 cM	20410
Gene Ontology	cell adhesion | cytoskeleton | protein binding
Human Homolog	SCAM-1[vinexin beta (SH3-containing adaptor molecule-1)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 31 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CACCTTACTT 1.6 0.0016 P8 Cb GC CAGCAATGTG (3) 1.6 0.0016 P8 Cb GC TACCCTGCCG 1.6 0.0016 Cb medulloblastoma GCAGTTTGGA (2) 2.3 0.0023 Cb medulloblastoma TGGGCAAAAA (2) 2.3 0.0023 P8 GC+1d culture TACCCTGCCG 2.3 0.0023 P8 GC+1d culture CACCTTACTT 1.1 0.0011 P8 GC+1d culture CAGCAATGTG (3) 1.1 0.0011 P8 GC+SHH+1d culture CAGCAATGTG (3) 1.2 0.0012 P8 GC+SHH+1d culture GCAGTTTGGA (2) 1.2 0.0012 P8 GC+SHH+1d culture TGGGCAAAAA (2) 1.2 0.0012 E15 cortex TACCCTGCCG 4.9 0.0049 P1 cortex GCAGTTTGGA (2) 4.5 0.0045 Hypothalamus CAGCAATGTG (3) 1.8 0.0018 E12.5 retina CAGCAATGTG (3) 1.9 0.0019 E16.5 retina TACCCTGCCG 3.6 0.0036 E16.5 retina GCAGTTTGGA (2) 1.8 0.0018 P0.5 retina CACCTTACTT 3.9 0.0039 P2.5 retina GCAGTTTGGA (2) 5.3 0.0053 P2.5 retina CACCTTACTT 1.8 0.0018 P4.5 retina CACCTTACTT 2 0.002 P4.5 retina GCAGTTTGGA (2) 2 0.002 P4.5 retina TGGGCAAAAA (2) 2 0.002 P6.5 retina TACCCTGCCG 5 0.005 P6.5 retina CACCTTACTT 1.7 0.0017 P6.5 retina GCAGTTTGGA (2) 1.7 0.0017 P10.5 crx+ retina TACCCTGCCG 1.9 0.0019 P10.5 crx+ retina TGGGCAAAAA (2) 1.9 0.0019 Adult retinal GCAGTTTGGA (2) 1.9 0.0019 Adult retinal TGGGCAAAAA (2) 1.9 0.0019 ONL GCAGTTTGGA (2) 1.9 0.0019