Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.5071	Sema3c	sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C	5		20348
Gene Ontology	development | extracellular space | neurogenesis | semaphorin receptor binding
Human Homolog	SEMA3C[sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 25 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGATCCCCAG 3.3 0.0033 Cb medulloblastoma TGATCCCCAG 2.3 0.0023 P8 GC+1d culture AGAATTTAAT CTGTTTAGAT (5) GCTGTGGAAA (3) TGATCCCCAG 9 0.009 P8 GC+SHH+1d culture CTGTTTAGAT (5) 2.3 0.0023 E15 cortex GCTGTGGAAA (3) 4.9 0.0049 P1 cortex TGATCCCCAG 4.5 0.0045 Hypothalamus AGAATTTAAT GCTGTGGAAA (3) TGATCCCCAG 9 0.009 E12.5 retina TGATCCCCAG 5.6 0.0056 E14.5 retina CTGTTTAGAT (5) 1.8 0.0018 E18.5 retina CTGTTTAGAT (5) TGATCCCCAG 7.3 0.0073 P2.5 retina CTGTTTAGAT (5) 1.8 0.0018 P6.5 retina CTGTTTAGAT (5) TGATCCCCAG 5 0.005 P10.5 crx- retina CTGTTTAGAT (5) TGATCCCCAG 7.5 0.0075 P10.5 crx+ retina CTGTTTAGAT (5) TGATCCCCAG 5.7 0.0057 Adult retinal GCTGTGGAAA (3) 1.9 0.0019 ONL GCTGTGGAAA (3) 3.8 0.0038