Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.5120	Galc	galactosylceramidase	12	12 48.0 cM	14420
Gene Ontology	carbohydrate metabolism | galactosylceramidase activity | galactosylceramidase activity | galactosylceramide catabolism | hydrolase activity | hydrolase activity, acting on glycosyl bonds | lysosome
Human Homolog	GALC[galactosylceramidase (Krabbe disease)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 53 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCCTCCCCCC (6) 13.1 0.0131 P8 Cb GC GAGAACTGGT (4) 1.6 0.0016 Cb medulloblastoma GAAGTGACAG (5) 9.2 0.0092 Cb medulloblastoma GAGAACTGGT (4) 9.2 0.0092 Cb medulloblastoma CCCTCCCCCC (6) 6.9 0.0069 P8 GC+1d culture CCCTCCCCCC (6) 11.4 0.0114 P8 GC+1d culture GAGAACTGGT (4) 1.1 0.0011 P8 GC+SHH+1d culture CCCTCCCCCC (6) 9.4 0.0094 P8 GC+SHH+1d culture GAGAACTGGT (4) 3.5 0.0035 P8 GC+SHH+1d culture GAAGTGACAG (5) 1.2 0.0012 3T3 fibroblasts GAAGTGACAG (5) 7 0.007 3T3 fibroblasts CCCTCCCCCC (6) 3.5 0.0035 3T3 fibroblasts GCTCATTCCC (2) 3.5 0.0035 E15 cortex CCCTCCCCCC (6) 19.8 0.0198 E15 cortex CCCTCGCCCC (8) 14.8 0.0148 E15 cortex GAAGTGACAG (5) 4.9 0.0049 P1 cortex GAAGTGACAG (5) 4.5 0.0045 P1 cortex GAGAACTGGT (4) 4.5 0.0045 Hypothalamus GAAGTGACAG (5) 5.4 0.0054 Hypothalamus GAGAACTGGT (4) 3.6 0.0036 E12.5 retina GAAGTGACAG (5) 20.7 0.0207 E12.5 retina CCCTCCCCCC (6) 9.4 0.0094 E14.5 retina GAAGTGACAG (5) 31 0.031 E14.5 retina CCCTCCCCCC (6) 1.8 0.0018 E14.5 retina GAGAACTGGT (4) 1.8 0.0018 E16.5 retina GAAGTGACAG (5) 23.5 0.0235 E16.5 retina CCCTCCCCCC (6) 10.9 0.0109 E16.5 retina GAGAACTGGT (4) 3.6 0.0036 E18.5 retina GAAGTGACAG (5) 27.3 0.0273 E18.5 retina CCCTCCCCCC (6) 7.3 0.0073 E18.5 retina GAGAACTGGT (4) 1.8 0.0018 P0.5 retina CCCTCCCCCC (6) 17.7 0.0177 P0.5 retina GAAGTGACAG (5) 17.7 0.0177 P2.5 retina GAAGTGACAG (5) 14.1 0.0141 P2.5 retina CCCTCCCCCC (6) 5.3 0.0053 P2.5 retina GCTCATTCCC (2) 1.8 0.0018 P4.5 retina GAAGTGACAG (5) 45.6 0.0456 P4.5 retina CCCTCCCCCC (6) 7.9 0.0079 P4.5 retina GAGAACTGGT (4) 2 0.002 P6.5 retina GAAGTGACAG (5) 18.3 0.0183 P6.5 retina GAGAACTGGT (4) 3.3 0.0033 P6.5 retina CCCTCCCCCC (6) 1.7 0.0017 P10.5 crx- retina GAAGTGACAG (5) 29.7 0.0297 P10.5 crx- retina CCCTCCCCCC (6) 1.9 0.0019 P10.5 crx- retina GAGAACTGGT (4) 1.9 0.0019 P10.5 crx+ retina GAAGTGACAG (5) 11.5 0.0115 P10.5 crx+ retina CCCTCCCCCC (6) 7.7 0.0077 P10.5 crx+ retina GAGAACTGGT (4) 1.9 0.0019 Adult retinal CCCTCCCCCC (6) 1.9 0.0019 Adult retinal GAAGTGACAG (5) 1.9 0.0019 ONL GAAGTGACAG (5) 9.6 0.0096 ONL CCCTCCCCCC (6) 5.7 0.0057 ONL GCTCATTCCC (2) 1.9 0.0019