Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.5181
Rnf19
ring finger protein (C3HC4 type) 19
15
30945
Mm.5181
5430434G16Rik
RIKEN cDNA 5430434G16 gene
15
71385
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 59 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CAATAAATGT (
4
)
14.7
0.0147
P8 Cb GC
AAATAAATGT
(
9
)
11.4
0.0114
P8 Cb GC
TTTTGTGTTC (
3
)
3.3
0.0033
P8 Cb GC
TCTGCTGTTC
(
2
)
1.6
0.0016
P8 Cb GC
TGCGACTGTT
(
2
)
1.6
0.0016
Cb medulloblastoma
AAATAAATGT
(
9
)
9.2
0.0092
Cb medulloblastoma
TTTTGTGTTC (
3
)
6.9
0.0069
Cb medulloblastoma
ATCCTCTTGG (
8
)
2.3
0.0023
Cb medulloblastoma
ATGTAAAAAA (
6
)
2.3
0.0023
P8 GC+1d culture
AAATAAATGT
(
9
)
8
0.008
P8 GC+SHH+1d culture
AAATAAATGT
(
9
)
4.7
0.0047
P8 GC+SHH+1d culture
AAATCAAAAC
(
4
)
1.2
0.0012
P8 GC+SHH+1d culture
ATGTAAAAAA (
6
)
1.2
0.0012
P8 GC+SHH+1d culture
CAATAAATGT (
4
)
1.2
0.0012
P8 GC+SHH+1d culture
TCTGCTGTTC
(
2
)
1.2
0.0012
3T3 fibroblasts
ATCCTCTTGG (
8
)
3.5
0.0035
3T3 fibroblasts
TGCGACTGTT
(
2
)
3.5
0.0035
P1 cortex
TTTTGTGTTC (
3
)
9.1
0.0091
P1 cortex
ATCCTCTTGG (
8
)
4.5
0.0045
Hypothalamus
AAATAAATGT
(
9
)
23.5
0.0235
Hypothalamus
AAAATCAAAA (
6
)
1.8
0.0018
Hypothalamus
AAATCAAAAC
(
4
)
1.8
0.0018
Hypothalamus
TCTGCTGTTC
(
2
)
1.8
0.0018
Hypothalamus
TTTTGTGTTC (
3
)
1.8
0.0018
E12.5 retina
AAATAAATGT
(
9
)
5.6
0.0056
E12.5 retina
CAATAAATGT (
4
)
3.8
0.0038
E12.5 retina
TTTTGTGTTC (
3
)
1.9
0.0019
E14.5 retina
CAATAAATGT (
4
)
7.3
0.0073
E14.5 retina
AAATAAATGT
(
9
)
5.5
0.0055
E14.5 retina
TTTTGTGTTC (
3
)
1.8
0.0018
E16.5 retina
AAATAAATGT
(
9
)
9.1
0.0091
E16.5 retina
CAATAAATGT (
4
)
3.6
0.0036
E18.5 retina
AAATAAATGT
(
9
)
10.9
0.0109
E18.5 retina
AAAATCAAAA (
6
)
3.6
0.0036
E18.5 retina
ATGTAAAAAA (
6
)
3.6
0.0036
E18.5 retina
CAATAAATGT (
4
)
3.6
0.0036
P0.5 retina
TCTGCTGTTC
(
2
)
3.9
0.0039
P0.5 retina
TTTTGTGTTC (
3
)
2
0.002
P2.5 retina
CAATAAATGT (
4
)
5.3
0.0053
P2.5 retina
AAATAAATGT
(
9
)
1.8
0.0018
P2.5 retina
TCTGCTGTTC
(
2
)
1.8
0.0018
P2.5 retina
TTTTGTGTTC (
3
)
1.8
0.0018
P4.5 retina
ATGTAAAAAA (
6
)
5.9
0.0059
P4.5 retina
AAATAAATGT
(
9
)
4
0.004
P4.5 retina
TTTTGTGTTC (
3
)
2
0.002
P6.5 retina
AAATAAATGT
(
9
)
8.3
0.0083
P6.5 retina
TTTTGTGTTC (
3
)
1.7
0.0017
P10.5 crx- retina
AAATAAATGT
(
9
)
3.7
0.0037
P10.5 crx- retina
AAATCAAAAC
(
4
)
3.7
0.0037
P10.5 crx- retina
ATCCTCTTGG (
8
)
1.9
0.0019
P10.5 crx- retina
TCTGCTGTTC
(
2
)
1.9
0.0019
P10.5 crx+ retina
AAATAAATGT
(
9
)
7.7
0.0077
P10.5 crx+ retina
TCTGCTGTTC
(
2
)
1.9
0.0019
P10.5 crx+ retina
TTTTGTGTTC (
3
)
1.9
0.0019
Adult retinal
TTTTGTGTTC (
3
)
7.4
0.0074
Adult retinal
AAATAAATGT
(
9
)
3.7
0.0037
Adult retinal
AAATCAAAAC
(
4
)
1.9
0.0019
ONL
AAATAAATGT
(
9
)
3.8
0.0038
ONL
AAAATCAAAA (
6
)
1.9
0.0019
